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. 2009 Jul 15;17(7):930–938. doi: 10.1016/j.str.2009.05.009

Table 3.

Overall Rmsd for Mutant and Native Methionine Sites from all Four Particles

Residue/Site Number of Atoms SD from the Mean (Å)
L9M 4 1.4
I19M 4 1.2
E31M 4 1.3
I41M 4 1.9
I49M 3 1.9
E61M 4 1.4
I75M 4 1.6
M67 27 2.5
M88 29 1.6
M134 32 1.1
M157 31 1.2

Three matrices were generated for the superposition of U1-70k selenium sites from U1 snRNP complexes B, C, and D onto the U1-70k selenium sites of complex A, using the program O (Jones et al., 1991). An SD from the mean was then calculated for each site from the transformed coordinates.

SD=1n·i=1n(x¯xi)2+(y¯yi)2+(z¯zi)2