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. Author manuscript; available in PMC: 2010 Aug 7.
Published in final edited form as: J Mol Biol. 2009 May 29;391(1):227–245. doi: 10.1016/j.jmb.2009.05.069

Table I.

P22 tail needle homologues.

Phage Gene or locus_tag2 Length (AA) N- term type 3 Number of heptads3 C- term type3 Host species
P221 26 233 1a 11 1a Salmonella enterica
Sari1 SARI_02643 233 1a 11 1a S. enterica
Shei1 SeHA_C0407 233 1a 11 1a S. enterica
Shei2 SeHB_A0362 233 1a 11 1a S. enterica
Schwartz1 SeSB_B0124 233 1a 11 1a S. enterica
ε341 9 233 1a 11 1c S. enterica
SE11 26 233 1a 11 1c S. enterica
Sdub1 SeD_A0645 233 1a 11 1c S. enterica
ST1041 26 233 1a 11 1c S. enterica
Shad1 SeH_A0882 212 1b 8 1b S. enterica
ParaC3 SPC_1303 212 1b 8 1b S. enterica
Scho1 SC060 212 1b 8 1b S. enterica
ST64T1 26 212 1b 8 1b S. enterica
L1 26 212 1b 8 1b S. enterica
Para1 –4 212 1b 8 1b S. enterica
Para2 SSPA2232a 212 1b 8 1b S. enterica
Sf61 9 282 1c 11 2 Shigella flexneri
B7A1 EcB7A_4183 282 1c 11 2 Escherichia coli
Flex301 SF0222 282 1c 11 2 S. flexneri
FLex8401 SFV_0226 282 1c 11 2 S. flexneri
Flex2457 S0244 282 1c 11 2 S. flexneri
Eco82-1 LF82_p094-140 317 1c 16 2 E. coli
HS1 EcHS_A0316 317 1c 16 2 E. coli
HK6201 hkbW 233 1c 11 1d E. coli
Eco989-1 EC55989_2607 282 1c 11 2 E. coli
Ferg1 EFER_2038 282 1c 11 2 Escherichia fergusonii
CUS-31 14 233 1d 11 1d E. coli
UT1 UTI89_C2647 233 1d 11 1d E. coli
APEC1 APECO1_4207 233 1d 11 1d E. coli
EcoS88-1 ECS88_2510 233 1d 11 1d E. coli
APSE-1 P30 118 2 3 1e Hamiltonella defensa
APSE-2 P30 176 2 3 1e H. defensa
φSG1 SGPHI_0017 177 3 3 1f Sodalis glossinidius
1

Shown to be a functional phage. The others were identified as P22-like prophages in the bacterial genome sequence. Additional details of the prophages will be published later. Some prophages such as APSE-1 and APSE-2 produce virion-like particles that have not yet been propagated.

2

The phage gene names are shown, and the GenBank locus_tags are given for the prophages. Locus-tags allow the reader to access the gene and protein sequences.

3

The N-terminal and C-terminal domain boundaries were estimated as described in the legend for figure 1. The number of heptads was determined by homology with the P22 gp26 protein and by inspection of fit to the consensus.

4

Gene not annotated in accession number CP000026.