Table 1.
Disease | Host/Environmental risk factor | Gene |
Rheumatoid arthritis | Diet (caffeine and Mediterranean diet) | PTPN22 |
Smoking | PADI4 | |
Hormones | CTLA4 | |
FCRL3 | ||
MHC2A | ||
HLA DRB1 | ||
Juvenile idiopathic arthritis | Macrophage inhibitory factor (MIF) | |
PTPN22 | ||
NRAMP1 | ||
IL-6 | ||
Psoriatic arthritis | Rubella vaccination | CARD15 |
Injury requiring medical consultation | MICA | |
Recurrent oral ulcers | TNF | |
Moving house | IL | |
Corticosteroids | ||
Pregnancy | ||
Ankylosing spondylitis | ARTS1 | |
IL-23R | ||
IL-1 gene cluster | ||
Cytochrome P450 2D6 (CYP2D6) gene | ||
Systemic lupus erythematosus | Breast-feeding | MHC |
Early natural menopause | ITGAM | |
Lipstick | IRF5 | |
BLK | ||
STAT4 | ||
PTPN22 | ||
FCGR2A | ||
Scleroderma | Exposure to silica or organic solvents | Familial risk |
HLA-DQA1 | ||
Fibrillin-1 SNP haplotypes | ||
TGF-β | ||
CTGF | ||
Foetal microchimerism | ||
Osteoarthritis | Obesity/Body mass index | IL-1 gene cluster |
Physical activity | Frizzled-related protein-3 (FRZB) gene | |
Grip strength | Matrilin-3 gene | |
Previous injury | IL-4 receptor | |
Metalloproteinase gene ADAM12 | ||
Asporin (ASPN) gene | ||
Estrogen receptor | ||
Gout | High purine diet | TNF-α promoter |
Dairy products | ||
Hypertension | ||
Pharmacologic agents | ||
Fibromyalgia and chronic widespread pain | Physical trauma | Serotonin transporter gene |
Somatisation | Familial risk | |
Health-seeking behaviour | COMT | |
Poor sleep |
ADAM12, a disintegrin and metalloproteinase domain 12; ARTS1, type 1 tumor necrosis factor receptor shedding aminopeptidase regulator; BLK, B lymphoid tyrosine kinase; CARD15, caspase recruitment domain 15; COMT, catechol-O-methyltransferase; CTGF, connective tissue growth factor; CTLA4, cytotoxic T lymphocyte-associated antigen-4; FCGR2A, Fc fragment of IgG, low-affinity IIA, receptor (CD32); FCRL3, Fc-receptor like-3; IL, interleukin; IRF5, interferon regulatory factor 5; ITGAM, integrin, alpha M; MHC, major histocompatibility complex; MHC2A, major histocompatibility complex 2A; MICA, class I major histocompatibility complex chain-related gene A; NRAMP1, natural-resistance-associated macrophage protein 1; PADI4, peptidyl arginine; PTPN22, protein tyrosine phosphatase; SNP, single-nucleotide polymorphism; STAT4, signal transducer and activator of transcription 4; TGF-β, transforming growth factor-beta; TNF, tumour necrosis factor.