Table 1.
template/primer | sequence for LDR (5′ 3′) |
---|---|
WT K-Ras template | TCC ACA AAA TGA TTC TGA ATT AGC TGT ATC GTC AAG |
GCA CTC TTG CCT ACG CCA CCA GCT CCA ACT ACC ACA AGT | |
TTA TAT TCA GTC ATC | |
MT K-Ras template | TCC ACA AAA TGA TTC TGA ATT AGC TGT ATC GTC AAG |
GCA CTC TTG CCT ACG CCA TCA GCT CCA ACT ACC ACA AGT | |
TTA TAT TCA GTC ATC | |
common LDR primer | 5Phosa/TGG CG/AmTb/ AGG CAA GAG TGC CTT GAC |
mutant LDR primer | GAA TAT AAA CTT GTG GTA G/FlurTc/T GGA GCT GA |
5Phos denotes a 5′ phosphorylation.
AmT denotes an aminated thymine.
FlurT denotes a fluorescein dT.
The italicized bases of the template sequences are the complementary nucleotides to both primers. The 3′ base in mutant LDR primer (bold) allows for specific discrimination of the two templates.