Table 4.
Summary of the microarray dataset used
| Dataset | Disease | n | m | Probes | Platform | |DV| | |DE| | |DV ∩ DE| |
|---|---|---|---|---|---|---|---|---|
| Stearman et al. (2005) | Lung adenocarcinoma | 19 | 20 | 12 625 | HG-U95Av2 | 1292 | 4668 | 854 |
| Haslett et al. (2002) | Duchenne muscular dystrophy | 12 | 12 | 12 625 | HG-U95Av2 | 12 | 1567 | 12 |
| Hong et al. (2007) | Colorectal cancer | 10 | 12 | 54 675 | HG-U133 Plus 2.0 | 35 | 5118 | 27 |
| CardioGenomics | Dilated cardiomyopathy | 14 | 27 | 54 675 | HG-U133 Plus 2.0 | 248 | 10 532 | 126 |
All datasets were generated from Affymetrix arrays. n is the number of arrays from non-diseased samples and m is the number of array from diseased samples. |DV|, |DE| and |DV ∩ DE| represent the number of DV genes, DE genes and genes that are both DE and DV, respectively.