Table 6.
Relationship between DE, DV and DC
| Dataset | Patterns | Normal |
Disease |
||
|---|---|---|---|---|---|
| Neg. | Pos. | Neg. | Pos. | ||
| Stearman | DV dec. | 0 | 149 | 1 | 16 |
| DV inc. | 0 | 2 | 49 | 183 | |
| DE dec. | 0 | 38 | 0 | 512 | |
| DE inc. | 1 | 11 | 0 | 58 | |
| Haslett | DV dec. | 49 | 111 | 19 | 33 |
| DV inc. | 19 | 21 | 140 | 382 | |
| DE dec. | 11 | 39 | 25 | 76 | |
| DE inc. | 6 | 144 | 2 | 379 | |
| Hong | DV dec. | 44 | 56 | 29 | 25 |
| DV inc. | 65 | 86 | 324 | 4356 | |
| DE dec. | 35 | 176 | 1 | 1528 | |
| DE inc. | 17 | 404 | 0 | 290 | |
| CardioGenomics | DV dec. | 78 | 484 | 0 | 1 |
| DV inc. | 6 | 82 | 706 | 12207 | |
| DE dec. | 1 | 68 | 0 | 761 | |
| DE inc. | 5 | 32 | 0 | 43 | |
The top ranking 200 genes with increasing/decreasing DV/DE are tested for DC. neg. = negatively coexpressed (r < −0.85), pos. = positively coexpressed (r > 0.85).