Table 2.
Dataset | Cancer code | N | Method | Number of Features |
||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4 | 8 | 16 | 40 | 60 | 80 | 100 | 150 | 250 | 500 | 862 | ||||
MIFS | 0.696 | 0.765 | 0.811 | 0.819 | 0.814 | 0.819 | 0.821 | 0.824 | 0.814 | 0.815 | ||||
poor4 | A,B,C,D | 803 | MRMR | 0.734 | 0.772 | 0.778 | 0.794 | 0.791 | 0.799 | 0.814 | 0.814 | 0.819 | 0.802 | 0.809 |
RFE | 0.567 | 0.644 | 0.681 | 0.706 | 0.746 | 0.771 | 0.794 | 0.814 | 0.821 | 0.821 | ||||
MIFS | 0.527 | 0.59 | 0.615 | 0.622 | 0.64 | 0.654 | 0.659 | 0.645 | 0.649 | 0.633 | ||||
poor6 | A,B,C,D,E,F | 815 | MRMR | 0.542 | 0.576 | 0.588 | 0.589 | 0.581 | 0.596 | 0.61 | 0.596 | 0.610 | 0.635 | 0.633 |
RFE | 0.337 | 0.37 | 0.431 | 0.531 | 0.551 | 0.564 | 0.578 | 0.593 | 0.608 | 0.635 | ||||
MIFS | 0.338 | 0.394 | 0.433 | 0.469 | 0.470 | 0.488 | 0.496 | 0.513 | 0.53 | 0.486 | ||||
poor8 | A,B,C,D,E,F,G,H | 764 | MRMR | 0.335 | 0.408 | 0.454 | 0.467 | 0.469 | 0.482 | 0.47 | 0.474 | 0.489 | 0.465 | 0.472 |
RFE | 0.259 | 0.274 | 0.303 | 0.39 | 0.423 | 0.435 | 0.457 | 0.456 | 0.456 | 0.475 | ||||
MIFS | 0.621 | 0.687 | 0.755 | 0.784 | 0.802 | 0.816 | 0.816 | 0.809 | 0.808 | 0.806 | ||||
fair4 | B,D,I,J | 812 | MRMR | 0.598 | 0.685 | 0.728 | 0.777 | 0.796 | 0.789 | 0.784 | 0.777 | 0.783 | 0.786 | 0.798 |
RFE | 0.466 | 0.527 | 0.608 | 0.693 | 0.753 | 0.753 | 0.771 | 0.786 | 0.787 | 0.806 | ||||
MIFS | 0.587 | 0.698 | 0.754 | 0.814 | 0.822 | 0.825 | 0.827 | 0.82 | 0.82 | 0.807 | ||||
fair6 | B,C,D,E,F,I | 880 | MRMR | 0.593 | 0.698 | 0.767 | 0.772 | 0.786 | 0.807 | 0.802 | 0.807 | 0.801 | 0.804 | 0.792 |
RFE | 0.504 | 0.64 | 0.696 | 0.761 | 0.775 | 0.78 | 0.781 | 0.78 | 0.797 | 0.816 | ||||
MIFS | 0.536 | 0.641 | 0.684 | 0.7 | 0.736 | 0.733 | 0.727 | 0.735 | 0.732 | 0.713 | ||||
fair8 | B,C,D,E,H,I,K,L | 767 | MRMR | 0.54 | 0.653 | 0.681 | 0.721 | 0.707 | 0.712 | 0.715 | 0.704 | 0.698 | 0.695 | 0.72 |
RFE | 0.398 | 0.528 | 0.616 | 0.677 | 0.687 | 0.688 | 0.702 | 0.70 | 0.701 | 0.709 | ||||
MIFS | 0.586 | 0.673 | 0.763 | 0.773 | 0.782 | 0.78 | 0.783 | 0.774 | 0.778 | 0.767 | ||||
good4 | B,D,H,M | 794 | MRMR | 0.609 | 0.681 | 0.755 | 0.761 | 0.779 | 0.78 | 0.78 | 0.77 | 0.772 | 0.761 | 0.755 |
RFE | 0.543 | 0.61 | 0.656 | 0.711 | 0.718 | 0.74 | 0.732 | 0.735 | 0.767 | 0.749 | ||||
MIFS | 0.455 | 0.551 | 0.593 | 0.645 | 0.709 | 0.716 | 0.724 | 0.697 | 0.7 | 0.694 | ||||
good6 | D,J,K,L,N,O | 867 | MRMR | 0.427 | 0.532 | 0.621 | 0.667 | 0.68 | 0.69 | 0.677 | 0.687 | 0.675 | 0.664 | 0.696 |
RFE | 0.339 | 0.437 | 0.517 | 0.597 | 0.638 | 0.653 | 0.66 | 0.682 | 0.674 | 0.698 | ||||
MIFS | 0.373 | 0.477 | 0.567 | 0.659 | 0.674 | 0.676 | 0.665 | 0.673 | 0.666 | 0.655 | ||||
good8 | D,E,H,J,K,N,P,Q | 827 | MRMR | 0.336 | 0.461 | 0.527 | 0.615 | 0.634 | 0.647 | 0.644 | 0.646 | 0.649 | 0.661 | 0.652 |
RFE | 0.258 | 0.346 | 0.424 | 0.508 | 0.53 | 0.581 | 0.605 | 0.624 | 0.632 | 0.654 | ||||
MIFS | 0.650 | 0.754 | 0.763 | 0.817 | 0.829 | 0.832 | 0.829 | 0.821 | 0.838 | 0.82 | ||||
best4 | A,D,E,R | 1158 | MRMR | 0.667 | 0.757 | 0.775 | 0.785 | 0.789 | 0.793 | 0.798 | 0.791 | 0.784 | 0.802 | 0.803 |
RFE | 0.596 | 0.659 | 0.708 | 0.753 | 0.766 | 0.789 | 0.776 | 0.791 | 0.803 | 0.817 | ||||
MIFS | 0.497 | 0.568 | 0.699 | 0.731 | 0.767 | 0.765 | 0.763 | 0.77 | 0.75 | 0.755 | ||||
best6 | A,D,E,H,O,R | 1095 | MRMR | 0.497 | 0.568 | 0.688 | 0.73 | 0.731 | 0.725 | 0.746 | 0.739 | 0.748 | 0.74 | 0.75 |
RFE | 0.449 | 0.499 | 0.587 | 0.667 | 0.71 | 0.712 | 0.727 | 0.729 | 0.736 | 0.749 | ||||
MIFS | 0.427 | 0.543 | 0.635 | 0.726 | 0.737 | 0.733 | 0.735 | 0.732 | 0.735 | 0.727 | ||||
best8 | A,D,E,F,H,K,L,R | 1016 | MRMR | 0.434 | 0.563 | 0.652 | 0.704 | 0.7 | 0.714 | 0.712 | 0.7 | 0.693 | 0.704 | 0.707 |
RFE | 0.342 | 0.429 | 0.532 | 0.641 | 0.648 | 0.687 | 0.694 | 0.723 | 0.719 | 0.724 | ||||
MIFS | 0.524 | 0.612 | 0.673 | 0.713 | 0.732 | 0.736 | 0.737 | 0.734 | 0.735 | 0.723 | ||||
Avg | N/A | N/A | MRMR | 0.518 | 0.606 | 0.664 | 0.696 | 0.702 | 0.709 | 0.71 | 0.707 | 0.707 | 0.706 | 0.716 |
RFE | 0.422 | 0.497 | 0.563 | 0.636 | 0.662 | 0.679 | 0.69 | 0.7 | 0.708 | 0.721 |
The best accuracy obtained for each dataset is highlighted in bold. Term N denotes the number of cases. The cancer codes are explained in Table 1.