Table 1.
Comparison of the haplotype reconstruction rate of the algorithms with es and eg varying
| Haplotype reconstruction rate (%) | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| eg | es=3% | es=5% | es=7% | ||||||
| (%) | WMLF/GS | MEC/GI | WMLF | WMLF/GS | MEC/GI | WMLF | WMLF/GS | MEC/GI | WMLF |
| 0 | 94.6 (94.7) | 90.5 (90.7) | 80.5 (80.4) | 94.2 (94.0) | 89.6 (90.5) | 79.8 (80.1) | 93.6 (93.7) | 90.1 (90.3) | 80.1 (79.6) |
| 3 | 94.3 (93.8) | 90.2 (89.5) | 81.1 (80.3) | 92.1 (93.7) | 88.3 (89.3) | 80.2 (80.0) | 92.1 (93.1) | 88.6 (88.9) | 79.0 (79.5) |
| 5 | 95.0 (93.8) | 89.6 (88.7) | 80.0 (80.5) | 93.5 (93.2) | 89.7 (88.5) | 79.3 (80.0) | 91.6 (92.6) | 87.5 (87.4) | 80.0 (79.7) |
| 7 | 93.9 (93.3) | 87.5 (88.7) | 79.8 (80.9) | 92.9 (93.2) | 88.4 (87.9) | 79.9 (80.2) | 92.8 (93.0) | 87.4 (87.3) | 80.1 (80.0) |
The data not enclosed in brackets are the experiment results on the real haplotype data, and the date enclosed in brackets are the experiment results on the simulated haplotype data. All experiments are repeated 100 times with n=100 and m=200.