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. 2008 Jul 1;24(13):i190–i195. doi: 10.1093/bioinformatics/btn166

Table 1.

Experimental dataset description

Protein name Length Temp. (C) Mutant name Temp. (C) Mutated residues
Shble 124 Tm: 67.4 HTS Tm: 85.1 G18E,D32V,L63Q,G98V
UVF Tm: 99 39 mutations
Dmeh 54 Tm: 49
UMC Tm: 99 40 mutations
β-GUS 603 45 TR3337 65 Q493R,T509A,M532T,N550S,G559S,N566S
mt1 Tm: 69.7 A46K,S48R
BsCSP 67 Tm: 53.8
mt2 Tm: 83.7 M1R,E3K,K65I
EcHPH 341 51 hph5 67 D20G,A118V,S225P,Q226L,T246A
12x 59.7 V71I,E130K,Q132R,Q137R,I150F,Q215L,R275Q,L276Q,I313L,V315A,A319E,A325V
PTDH 355 39
opt14 64.4 V71I,E130K,Q132K,Q137H,I150F,Q215L,R275L,L276C,I313L,V315A,A319E,A325V,A146S,F198M
CbADH 452 Tm: 65.5 Q100P ΔTm: +11.5 Q100P
FAOX 372 37 FAOX_TE 45 T60A,A188G,M244L,N257S,L261M
PDAO 347 45 F42C 55 F42C
mt18 ΔTm: +7, A58E,P65S,Q191R,T271R
PhyA 467 55
mt24 ΔTm: >+7 A58E,P65S,Q191R,T271R,E228K,S149P,F131L

In the first two columns the wild-type protein name and the protein length are reported. In the fourth column, the name of the mutant is reported. Columns 3 and 5 report optimal functional temperatures of the wild-type and the mutated sequence, respectively; Tm when present refers to the melting temperature; column 6 reports the mutated residues. In the case of Dmeh, the two mutants have 39 and 40 mutated residues, respectively (Shah et al., 2007). The considered proteins are: Shble: bleomycin-binding protein from the mesophilic bacterium Streptoalloteichus hindustanus (Brouns et al., 2005); Dmeh: Drosophila melanogaster engrailed homeodomain (Shah et al., 2007); β-GUS: β-glucuronidase (Xiong et al., 2007); BsCSP: cold shock proteins from Bacillus subtilis (Max et al., 2007); EcHPH: Escherichia coli hygromycin B phosphotransferase (Nakamura et al., 2005); PTDH: phosphite dehydrogenase from Pseudomonas stutzeri (Johannes et al., 2005; McLachlan et al., 2007) CbADH: Clostridium beijerinckii alcohol dehydrogenase (Goihberg et al., 2007); FAOX: fructosyl-amino acid oxidase from Corynebacterium sp. (Sakaue and Kajiyama, 2003); pDAO: porcine kidney D-amino acid oxidase (Bakke et al., 2006); PhyA: 3-phytase A from Aspergillus niger (Zhang and Lei, 2007).