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. 2009 Apr 1;284(25):17039–17051. doi: 10.1074/jbc.M901789200

TABLE 1.

List of top five proteins with the most decreased levels in the cytoplasmic fraction of H460 cells after 6 and 24 h of treatment with 15 μm PEITC

Two isoforms of actin are also listed for comparison. The percentage of level change relative to the untreated control was ranked as indicated in Fig. 2, A and B. The p value was included to indicate the statistical significance of the protein quantitation. The unused value is confidence measurement of protein identification where a value of 1 indicates 90% confidence, and a value of >2 indicates 100% confidence. Sequence coverage was calculated by dividing the number of amino acids observed by the protein amino acid length.

Level change ranking Change in % of control p value for quantitation Protein name NCBI accession number Unused value Sequence coverage
%
6 h of treatment
    1 −65.763 0.000494 Tubulin β chain P07437 13.08 79.7
    2 −56.687 0.013724 Tubulin β-2C chain P68371 1.73 78.8
    3 −49.941 9.88E-11 Tubulin α-1B chain P68363 18.14 66.5
    4 −46.716 0.084579 Neuroblastoma breakpoint family member 3 Q9H094 1.11 21.8
    5 −39.480 0.047385 Tubulin α-1C chain Q9BQE3 1.44 65.0
168 3.8304 0.188479 Actin, cytoplasmic 1 P60709 43.98 87.7
192 6.2065 0.136969 Actin, cytoplasmic 2 P63261 2.22 83.3

24 h of treatment
    1 −67.135 0.000698 Tubulin β chain P07437 13.08 79.7
    2 −54.784 4.96E-11 Tubulin α-1B chain P68363 18.14 66.5
    3 −53.853 0.041881 Tubulin β-2C chain P68371 1.73 78.8
    4 −44.660 0.025489 Tubulin α-1C chain Q9BQE3 1.44 65.0
    5 −28.895 0.462542 Importin-4 Q8TEX9 2.09 23.9
69 −4.1809 0.010398 Actin, cytoplasmic 1 P60709 43.98 87.7
170 5.0402 0.148074 Actin, cytoplasmic 2 P63261 2.22 83.3