Table 4.
Description of the 14 loci, the position of the indels in the aligned accD-psa1 matrix, the alleles found and a description of alleles for the insertions/deletions
| Locus | Type | Position† | Alleles | Allele description‡ |
|---|---|---|---|---|
| 1 | accD-psa1 microsatellite (A)n | – | 1,2,3,4 | |
| 2 | accD-psa1 indel 1 | 350 | 1,2,3 | long insert–no insert–short insert |
| 3 | accD-psa1 indel 2 | 400 | 1,2,3,4 | long–middle–short–none |
| 4 | accD-psa1 indel 3 | 465 | 1,2 | normal–deletion |
| 5 | accD-psa1 indel 4 | 522 | 1,2,3 | insert–normal–deletion |
| 6 | accD-psa1 indel 5 | 630 | 1,2 | normal–insert |
| 7 | accD-psa1 indel 6 | 750 | 1,2,3 | normal–short insert–long insert |
| 8 | accD-psa1 indel 7 | 812 | 1,2 | normal–insert |
| 9 | accD-psa1 indel 8 | 895 | 1,2 | normal–deletion |
| 10 | accD-psa1 indel 9 | 1050 | 1,2 | normal–deletion |
| 11 | accD-psa1 indel 10 | 1208 | 1,2 | normal–insert |
| 12 | rps16-1 microsatellite (A)n | – | 1,2 | |
| 13 | rps16-2 microsatellite (A)n | – | 1,2,3 | |
| 14 | cyp2 microsatellite (ATn)nTn | – | 1,2,3,4 |
† Position in base pairs in aligned accD-psa1 matrix.
‡ ‘Normal’ refers to the condition found in the majority of samples. Directionality of insertions and deletions is inferred, with the commonest allele being treated as ‘normal’.