Table 3.

Nucleotide and amino acid substitutions in the informative sites of genotype III.

Nucleotide								Domains
		Genotype III
				Lineage I		Lineage II
Position		Lineage		Sub-Lineage		Sub-Lineage
Gene	Codon	I	II	I	II	I	II
96	3					C	T	I
117	3					C	A
121	1	C	T
157	1					C	T
312	3	T	A
423	3	T	C
588	3	A	G					II
633	3	C	T
672	3					C	T
784	1	C	T
825	3					C	T
1050	3	C	T					II
1131	3					A	G
1170	3					C	T
1185	3			G	T			TM
1314	3	T	C
1356	3	G	A
1374	3	T	A
1473	3	A	G

Domain I: 1–156^nt (1–52^aa); 397–573^nt (133–191^aa); 835–882^nt (279–294^aa)

Domain II: 157–396^nt (53–132^aa); 574–834^nt (192–278^aa)

Domain III: 883–1176^nt (295–392^aa)

Domain TM: 1177–1479^nt (393–493^aa)

nt:are indicated the nucleotide positions

aa::are indicated the amino acid positions