Table 3.
Galα(1,3)Gal | Fucα (1,2)Gal | |||
---|---|---|---|---|
ϕ | ψ | ϕ | ψ | |
MOA α-site | 46.8° | 64.1° | 304° | 275° |
MOA β-site | 44.7° | 66.7° | 295° | 252° |
MOA γ-site | 50.5° | 60.2° | 291° | 237° |
PDBid 2OBT14 | 54.1° | 99.0° | 287° | 238° |
PDBid 2VNO-115 | 66.4° | 59.8° | 285° | 261° |
PDBid 2VNO-215 | 72.6° | 57.0° | 284° | 257° |
Trisaccharide13 | 56.3° | 60.0° | 294° | 269° |
Glycosidic torsion angles (ϕ: O5-C1-O-Cx′ and ψ: C1-O-Cx′-Cx+1′) calculated for the two glycosidic linkages in Galα(1,3)[Fucα(1,2)]Gal. Shown are values for the trisaccharide bound at the three distinct sites in MOA, for the trisaccharide bound to norovirus14, for the trisaccharide bound at two sites in the Clostridium perfringens CBM15 and for the unbound trisaccharide13.