Table 3.
Illumina 610 Microarray Data: QC Analysis On DNA Obtained from Two 3 mm Guthrie Card Punches
| Specimen Name | No Calls | Calls | Total | Call Rate (%) |
| Primary DNA Isolate | ||||
| MOD 881 | 1484 | 591008 | 592492 | 99.75 |
| MOD 892 | 1581 | 590911 | 592492 | 99.73 |
| MOD 919 | 1502 | 590990 | 592492 | 99.75 |
| MOD 937 | 1607 | 590885 | 592492 | 99.73 |
| MOD 920 | 2524 | 589968 | 592492 | 99.57 |
| MOD 975 | 2840 | 589652 | 592492 | 99.52 |
| MOD 986 | 2432 | 590060 | 592492 | 99.59 |
| MOD 001 | 3240 | 589252 | 592492 | 99.45 |
| Corresponding Whole Genome Amplified DNA | ||||
| WGA 881 | 31699 | 560793 | 592492 | 94.65 |
| WGA 892 | 19207 | 573285 | 592492 | 96.76 |
| WGA 919 | 27928 | 564564 | 592492 | 95.29 |
| WGA 937 | 17094 | 575398 | 592492 | 97.11 |
| WGA 920 | 27680 | 564812 | 592492 | 95.33 |
| WGA 975 | 27080 | 565412 | 592492 | 95.43 |
| WGA 986 | 22501 | 569991 | 592492 | 96.20 |
| WGA 001 | 34458 | 558034 | 592492 | 94.18 |
SNP call rates were determined by Illlumina BeadArray analysis.