Table 1.
Minimal amplicon cores at 8p12 and 11q13
| Amplicon | Flanking clone | Genes in (or partially in) flanking clone or amplicon core |
|---|---|---|
| 8p A1 | RP11-101H15 | no genes |
| ZNF703, ERLIN2, PROSC, GPR124, BRF2, RAP11FIP1 | ||
| CTC-497A2 | GOT1L1, ADRB3, EIF4EBP1 | |
|
| ||
| 8p A2 | RP11-90P5 | ASH2L, STAR, LSM1, BAG4, (DDHD2) |
| DDHD2, PPAPDC1B, WHSC1L1, FGFR1 | ||
| RP11-647P1 | TACC1, (PLEKHA2) | |
|
| ||
| 8p A3 | RP11769N8 | ADAM18 |
| ADAM2, INDO1, INDOL1, C8orf4 | ||
| RP11-51K12 | ZMAT4 | |
|
| ||
| 8p A4 | RP11-407N24 | GOLGA7, GINS4, (AGAT6) |
| AGAT6, NKX6-3, ANK1 | ||
| RP11-109A10 | MYST3 | |
|
| ||
| 11q A1 | RP11-40B5 | TPCN2 |
| MEOV, OCIM, CCND1 | ||
| CTD-3190C8 | ORAOV1, FGF19, BF510715, FGF4, FGF3 | |
|
| ||
| 11q A2 | RP11-368I20 | no genes |
| TMEM16A, FADD, PPFIA1, CTTN | ||
| RP11-916J3 | SHANK2 | |
|
| ||
| 11q A3.1 | RP11-133F12 | UVRAG |
| WNT11, PRKRIR, C11orf30 | ||
| RP11-115O9 | LRRC32 | |
|
| ||
| 11q A3.2 | CTD-2501F13 | C11orf30 |
| LRRC32, TSKU | ||
| RP11-259H21 | PHCA | |
|
| ||
| 11q A4 | CTD-2504L8 | PHCA, B3GNT6, OMP, CAPN5 |
| MYO7A, GDPD4, PAK1, AQP11, CLNS1A, RSF1, C11orf67 | ||
| RP11-7I15 | INTS4, KCTD14, THRSP, NDUFC2 | |