Table I.
Genotype Frequenciesa | Allele Frequenci | ||||||
---|---|---|---|---|---|---|---|
Allelic Variantc | Effectd | Ne | Wtf | Het | Var | p | |
Docetaxel alone (N = 23)g | |||||||
ABCB1 1236C>T | G411G | 23 | 13 (56.5) | 8 (34.8) | 2 (8.7) | 0.739 | 0. |
ABCB1 2677G>T | A893S | 23 | 11 (47.8) | 9 (39.1) | 2 (8.7) | 0.674 | 0. |
ABCB1 2677G>A | A893Th | 23 | 11 (47.8) | 1 (4.3) | 0 (0) | 0.674 | 0. |
ABCB1 3435C>T | I1145I | 23 | 7 (30.4) | 10 (43.5) | 6 (26.1) | 0.522 | 0. |
Docetaxel Plus Thalidomide (N = 50) | |||||||
ABCB1 1236C>T | G411G | 46 | 12 (26.1) | 18 (39.1) | 16 (34.8) | 0.457 | 0. |
ABCB1 2677G>T | A893S | 50 | 15 (30.0) | 20 (40.0) | 15 (30.0) | 0.500 | 0. |
ABCB1 3435C>T | I1145I | 45 | 10 (22.2) | 23 (51.1) | 12 (26.6) | 0.478 | 0. |
Number represent number of patients with percentage in parenthesis; the difference in the total number of patients is due Hardy-Weinberg notation for allele frequencies (p, frequency for wild type allele and q, frequency for variant allele);
Num represents position in nucleotide sequence;
Number represents amino acid codon;
genotype data were not available in all patients as not all samples yielded sufficient DNA or PCR amplified;
WT, Homozygous wild-type allele patient; Het, Heterozygous patient; Var, Homozygous variant patient;
A single Hispanic male was also included, and his genotype was 1236C>T, unknown; 2677G>T/A, wild-type; 3435C>T, wild-type;
The 2677G>T/A polymorphism is triallelic and two d SNPs are therefore presented.