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. Author manuscript; available in PMC: 2010 Jul 17.
Published in final edited form as: J Mol Biol. 2009 May 23;390(3):368–379. doi: 10.1016/j.jmb.2009.05.037

Table 1.

DNA substrates

21-19/41A-mer 5’-CGCAGCCGTCCAACCAACTCA CGTCGATCCAATGCCGTCC-3’
3’-GCGTCGGCAGGTTGGTTGAGTAGCAGCTAGGTTACGGCAGG-5’
22-18/41G–mer 5’-CGCAGCCGTCCAACCAACTCAC GTCGATCCAATGCCGTCC-3’
3’-GCGTCGGCAGGTTGGTTGAGTGGCAGCTAGGTTACGGCAGG-5’
22ddC-18/41G–mer 5’-CGCAGCCGTCCAACCAACTCAC GTCGATCCAATGCCGTCC-3’
3’-GCGTCGGCAGGTTGGTTGAGTGGCAGCTAGGTTACGGCAGG-5’

The downstream 18-mer and 19-mer strands were 5′-phosphorylated. “C” denotes ddCMP.