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. 2009 Jul 21;10:330. doi: 10.1186/1471-2164-10-330

Table 2.

Putative TSDs flanking TvMULEs and the unknown repeat

Family TSD

Length (bp) Sequence
TvMULE2 10 ATATATCGGC
TTTATCGCTGa
11 AATTGATGAAA
CCTTAATTCAA
CCATTTTGATA
TAATTCTCCAT
TTTCCCTGAAA
TGGTTTTATGA
GAAACAATTAA
12 TTAAATTACTTC
14 AATTAAAAAAATAT
TvMULE3 11 CTATTTAAAAG
TTTTTTGATAA
TTTAAGGTGTT
TvMULE4 12 AAAAAATTTTGA
AATTTTTTCGAA
ATATATCTTTAA
ATTTTTGAAAAA
TATACATATATA
TTATTATTTTAA
TTTCTTTTTTAT
13 AAAAATTTTGAAA
ATTTTTTCTGGAT
AGATTTTTGAAAA
CTTATTTTTTGAA
TTTCAAAATTTTT
Unknown 8 TAGATTTTb
9 ATCAAAAAGc

aDuplication upon the chosen canonical copy;

Duplication upon the insertion contained in the: bcontig 85938 and ccontig91860.