Table 3.
The association between haplotypes in immune regulatory and DNA repair pathways and stomach cancer
Gene | Haplotype* | Frequencies | Crude | Adjusted† | |||||
---|---|---|---|---|---|---|---|---|---|
Controls | Cases | OR | 95% CI | P value | OR | 95% CI | P value | ||
PTGS2 | GTTC | 0.93 | 0.96 | 1.00 | 1.00 | ||||
CTTC | 0.04 | 0.02 | 0.41 | (0.18, 0.95) | 0.038 | 0.30 | (0.12, 0.76) | 0.011 | |
GTCC | 0.02 | 0.01 | 0.83 | (0.27, 2.56) | 0.750 | 0.92 | (0.27, 3.16) | 0.894 | |
ERCC5 | TGC | 0.30 | 0.32 | 1.00 | 1.00 | ||||
TGG | 0.40 | 0.43 | 1.02 | (0.73, 1.44) | 0.893 | 1.15 | (0.79, 1.66) | 0.465 | |
CGC | 0.18 | 0.18 | 0.93 | (0.61, 1.42) | 0.744 | 1.09 | (0.69, 1.72) | 0.706 | |
CCG | 0.07 | 0.03 | 0.41 | (0.20, 0.86) | 0.018 | 0.45 | (0.20, 1.04) | 0.062 | |
CGG | 0.04 | 0.04 | 0.93 | (0.45, 1.95) | 0.857 | 0.84 | (0.36, 1.91) | 0.670 | |
RAD51 | CG | 0.73 | 0.72 | 1.00 | 1.00 | ||||
CT | 0.14 | 0.14 | 1.01 | (0.71, 1.44) | 0.970 | 1.07 | (0.71, 1.62) | 0.731 | |
TG | 0.06 | 0.11 | 1.98 | (1.15, 3.41) | 0.013 | 1.95 | (1.02, 3.74) | 0.045 | |
TT | 0.06 | 0.03 | 0.44 | (0.07, 2.84) | 0.391 | 0.40 | (0.04, 3.86) | 0.430 |
Alleles in each haplotype are listed from 5' to 3' (TNFA, rs1799964 and rs1800629; PTGS2, rs5277, rs5278, rs5279, and rs689470; ERCC5, rs1047768, rs2227869, and rs17655; RAD51, rs309298 and rs12593359; RAD52, rs2887532 and rs10849594) Variant alleles are underlined
ORs are adjusted for sex, age, body mass index, education, cigarette smoking, alcohol drinking, very hot foods eating habits, H. pylori CagA status, and green tea drinking