TABLE 2.
Arthropod-borne human pathogens that are not amplified by the molecular consensus assaya
| Family (genus) | Serogroup | Virusb | Strain | Source, location, and yr of isolation |
|---|---|---|---|---|
| Bunyaviridae (Orthobunyavirus) | Nyando | Nyando virus | MP 401 | Eretmapodites chrysogaster, Cameroon, 1966 |
| California | Guaroa virus | CoH 352111 | Human, Colombia, 1956 | |
| Group C | Apeu virus | BeAn 848 | Cebus apella, Brazil, 1955 | |
| Caraparu virus | BeAn 3994 | Cebus apella, Brazil, 1956 | ||
| Itaqui virus | BeAn 1297 | Sentinal mouse, Brazil, 1959 | ||
| Madrid virus | BT 4075 | Human, Panama, 1961 | ||
| Marituba virus | BeAn 15 | Cebus apella, Brazil, 1954 | ||
| Nepuyo virus | BeAn 10709 | Sentinal mouse, Brazil, 1959 | ||
| Oriboca virus | BeAn 17 | Sentinel monkey, Brazil, 1954 | ||
| Restan virus | TRVL 51144 | Culex spp., Trinidad, 1963 | ||
| Guama | Catu virus | BeH 151 | Human, Brazil, 1955 | |
| Guama virus | BeAn 277 | Cebus apella, Brazil, 1955 | ||
| Flaviviridae | Dengue virus group | Dengue 2 virus | New Guinea C | Human, New Guinea, 1944 |
| (Flavivirus) | Yellow fever virus group | Yellow fever virus | 17D | Vaccine strain |
| Spondweni virus group | Zika virus | YAP-human, 2007 | RNA transcript derived from PCR-amplified DNA | |
| Japanese encephalitis virus group | St. Louis encephalitis virus | TBH-28 | Human, Florida, 1962 | |
| Japanese encephalitis virus group | West Nile virus | NY99 | Phoenicopterus ruber, New York, 1999 | |
| Japanese encephalitis virus group | Japanese encephalitis virus | SA-14-2-8 | Vaccine strain | |
| Togaviridae (Alphavirus) | Venezuelan equine encephalomyelitis virus complex | Venezuelan equine encephalomyelitis virus | TC83 | Vaccine strain |
| Western equine encephalitis virus complex | Western equine encephalitis virus | McMillan | Human, Ontario, Canada, 1941 | |
| Semliki Forest virus complex | ONNV | UgMP 30 | Human, Uganda, 1959 | |
| Semliki Forest virus complex | CHIKV | Original | Human, Tanganyika, 1953 |
a
All viruses were evaluated with both the Orthobunyavirus and Phlebovirus/Nairovirus primer mixes.
b
All evaluated viruses have a minimum titer of 10,000 PFU/ml in Vero cells. ONNV, O'nyong-nyong virus; CHIKV, Chikungunya virus.