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. Author manuscript; available in PMC: 2009 Aug 14.
Published in final edited form as: Biochemistry. 2006 Jul 4;45(26):7959–7975. doi: 10.1021/bi052183d

Table 4.

Relative Energy of Different Protonation States of BNC Cluster Residues in the Fully Oxidized BNCa

state energy, pH 7 (ΔpK units) OH heme a3 OH CuB His I-334b Tyr I-288 site pK7c
neutral state
 16.4 0 0 0 0
single anion
0 0 1 0 0 9.4
 4.4 −1 0 0 0 −5.0
 10.7 0 0 0 −1 1.3
 11.7 0 0 −1 0 2.3
dianionic states
 1.6 0 −1 0 −1
 3.3 −1 0 −1 0
 3.7 −1 −1 0 0
 10.1 0 0 −1 −1
a

Energies are relative to the state with a single OH on CuB (in bold). Ionization of all other key residues are given in Table 1.

b

Using the model for His in complex with water–CuB with a pKa,sol of 9.0 (40).

c

pK′7 for groups assigned a −1 charge. This is different from that given in Table 2 since those are calculated with the ionization given in Table 1 while here the BNC residues are in the explicitly defined, nonequilibrium ionization states. 1 ΔpK unit is 1.36 kcal/mol.