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. 2009 Jan 27;26(5):983–993. doi: 10.1093/molbev/msp013

Table 1.

Sola1 Sequences in Diverse Genomes

Species Family Name Representative Accession No. Coordinates Element Length (bp) TIR Length (bp) TPase Length (aa) Approximate Copy Number Per Haploid Genome
Acyrthosiphon pisum Sola1-1_AP AC202225.3 9,499–4,777 4,723 36 581 1
Sola1-2_AP AC202215.4 6,161–10,972 4,812 32 697 1
Aedes aegypti Sola1-1_AA AAGE02012735.1 131,791–135,075 3,285 36 614 4
Sola1-2_AA AAGE02003977.1 18,829–21,741 2,912 31 694a 4
Aplysia californica Sola1-1_AC AASC01129179.1 6,845–2,749 4,097 26 686 25
Bacillus selenitireducens Sola1-1_BSe ABHZ01000025.1 181–3,248 (partial) 1,022a
Beggiatoa sp. PS Sola1-1_BPs ABBZ01000008.1 9,958–12,045 2,088 35 634a 1
Sola1-2_BPs ABBZ01001030.1 7–2,070 2,064 35 613a 1
Bombyx mori Sola1-1_BM BAAB01062465.1 7,337–3,598 3,740 35 650a 1
Capitella capitata Sola1-1_CC AC158486.2 19,276–13,018 6,259 29 552a 1
Ciona intestinalis Sola1-1_CI AABS01000302.1 73,197–71,689 (partial)
Ciona savignyi Sola1-1_CS AACT01041147.1 43,246–39,967 3,315 45 3
Culex pipiens Sola1-1_CP AAWU01020699.1 43,567–46,377 2,811 32 592a 3
Danio rerio CAAK04054883.1 21,366–20,770 (partial)
Drosophila willistoni Sola1-1_DW AAQB01010763.1 12,216–93,18 2,899 30 512a 2
Hydra magnipapillata Sola1-1_HM ABRM01021920.1 1,917–5,396 3,479 51 637a 100
Sola1-2_HM ABRM01008493.1 24,074–20,608 3,460 36 731 20
Sola1-3_HM ABRM01029985.1 3,793–616 3,185 36 699 35
Sola1-4_HM ABRM01040714.1 4,466–7,789 3,278 62 592 40
Sola1-5_HM ABRM01031963.1 5,055–8,958 3,914 31 590a 23
Ixodes scapularis ABJB010584993.1 22–651 (partial)
Jakoba bahamiensis EC687580.1 2–715 (partial)
EC685863.1 1–606 (partial)
Monosiga brevicollis Sola1-1_MB ABFJ01001366.1 38,668–41025 2,358 40 652a 1
Sola1-2_MB ABFJ01000130.1 45,539–44,112 (partial)
Nasonia vitripennis Sola1-1_NVi AAZX01003733.1 12,224–11,457 (partial)
Nematostella vectensis Sola1-1_NV ABAV01012191.1 249–8,919 8,671 43 2
Physcomitrella patens Sola1-1_PP ABEU01007013.1 29,546–45,209 15,665 29 958 17
Phytophthora infestans Sola1-1_PI AATU01005989.1 53,781–50,846 2,936 34 791a 8
Phytophthora ramorum Sola1-1_PR AAQX01002811.1 6,803–4,030 2,769 50 733a 4
Phytophthora sojae Sola1-1_PS AAQY01000636.1 9,636–12,659 3,053 34 815a 7
Schmidtea mediterranea NZ_AAWT01089611 21,764–22,111 (partial)
Strongylocentrotus purpuratus Sola1-1_SP AAGJ02023219.1 322–10,610 10,289 30 737 2
Sola1-2_SP AAGJ02131127.1 13,578–3,550 10,029 30 800a 1
a

Protein sequences are predicted: missing the start codon, containing stop codons or small indels, or frame being shifted.