Table 8.
Ref. | Transcripts examined | Species | Number of samples/controls | Tissue of interest | Control tissue | Similar genes upregulated |
9 | 18057 oligonucleotides microarray | Human | 6/7 | AAA | Normal# | Chemokines (e.g. CCL2, CCL4, CCL8, CCR5, CXCL5, CXCR4, TNFRSF13B) Pro-inflammatory cytokines (e.g. IL1B, IL2RG) Matrix metalloproteinase (e.g. MMP9) Cell lineage markers (e.g. CD53, CD68, CD72) |
32‡ | 1181 cDNA clones | Mice | 3/3** | Elastase induced AAA | Inactivated elastase infused aortas | Pro-inflammatory cytokines (e.g. IL1B, IL6, INF, IGF1) Chemokines (e.g. CCL7) JAK-STAT signalling (e.g. SOC3) |
31‡ | 375 cDNA clones | Human | 1/1* | AAA body | AAA neck | Chemokines (e.g. CXCR2) |
28‡ | 265 cDNA clones | Human | 7/5/5† | AAA | AOD and normal† | Matrix metalloproteinase (e.g. MMP9, MMP12) Pro-inflammatory cytokines (e.g. IL1B, IL6) Chemokines (e.g. CCL4, CCR5) Fibrinolysis (e.g. uPA) |
33‡ | 8799 cDNA clones microarray | Rat | 1/1‡‡ | Elastase induced AAA | Saline infused aortas | Oxidative stress (Heme oxygenase, lipoxygenase) |
34‡ | 1176 cDNA clones | Human | 4/4 | AAA | normal†† | Cathepsins (e.g. cathepsin H) Matrix metalloproteinase (e.g. MMP9) Chemokines (e.g. CXCR4, CCL5) |
*Results provided limited; †5 controls from aortic occlusive disease (AOD) from patients undergoing bypass and 5 controls from organ donors which were not age-matched; ‡These studies did not adjust for multiple testing; **pooling of samples was performed with 3 pools of interest compared with 3 controls for 4 different time periods after elastase infusion; ††Controls were from organ donor who were not matched; ‡‡Appears to have been comparison of one pool of samples from elastase induced aaas and one pool from controls examined on two microarrays each; #controls from post-mortem samples. Ref. = reference.