Table 2.

Percent identity of isolate Ecu534 VP4 coding nucleotide (cds) and amino acid (aa) sequence compared with 27 rotavirus VP4 genotypes from GenBank. The aa identity for the VP8* subunit of VP4 is also shown. The most similar two sequences are shown in bold.

Genotype	host^a	Accession no.	isolate name	VP4 cds	VP4 aa	VP8* aa
P[1]	bo	Y00127	C486	72%	78%	67%
P[2]	si	X14204	SA11	73%	80%	69%
P[3]	fe	D14723	FRV64	73%	80%	68%
P[3]	ca	D13400	K9	72%	79%	67%
P[4]	hu	AB118025	DS-1	68%	70%	58%
P[5]	bo	M63267	UK-or-B641	67%	70%	57%
P[6]	hu	AF079356	US1205	68%	71%	56%
P[7]	po	X13190	OSU	71%	76%	67%
P[8]	hu	L34161	Wa	67%	69%	54%
P[9]	hu	D90260	K8	68%	70%	58%
P[10]	hu	M60600	69M	72%	78%	68%
P[11]	hu	L07934	116E	60%	59%	40%
P[12]	eq	D16342	FI23	71%	76%	64%
P[13]	po	L07886	MDR-13	70%	74%	61%
P[14]	hu	D14032	Mc35	67%	71%	59%
P[15]	ov	L11599	Lp14	73%	77%	69%
P[16]	mu	U08419	EB	67%	74%	59%
P[17]	av	AB009632	PO-13	62%	61%	39%
P[18]	eq	D13399	L338	72%	74%	64%
P[19]	hu	D38052	Mc323	70%	72%	60%
P[20]	mu	U08424	EHP	69%	75%	66%
P[21]	bo	AF237665	Hg18	70%	72%	56%
P[22]^b	la	AF526373	308/01	64%	61%	60%
P[23]^b	po	AY768809	34461-4	67%	69%	66%
P[24]	si	AY596189	TUCH	72%	77%	64%
P[25]	hu	AY773004	Dhaka6	68%	68%	54%
P[26]	po	DQ061053	134/04-15	70%	75%	64%
P[27]	po	DQ534016	CMP034	69%	72%	56%
P[28]	hu	EU805773	Ecu534	-	-	-

Host abbreviations: av, avian; bo, bovine; ca, canine; ch, chicken; eq, equine; fe, feline; hu, human; la, lapine; mu, murine; ov, ovine; po, porcine; si, simian; ty, turkey.

Genotype represented by strain with incomplete sequence data.