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. 2009 Jun 26;104(4):757–765. doi: 10.1093/aob/mcp153

Fig. 7.

Fig. 7.

Evolutionary relationships of 29 taxa. The evolutionary history was inferred using the neighbor-joining method (Saitou and Nei, 1987). The bootstrap consensus tree inferred from 1000 replicates (Felsenstein, 1985) is taken to represent the evolutionary history of the taxa analysed (Felsenstein, 1985). Branches corresponding to partitions reproduced in <50 % bootstrap replicates are collapsed. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches (Felsenstein, 1985). The tree is drawn to scale, with branch lengths in the same units as those of the evolutionary distances used to infer the phylogenetic tree. The evolutionary distances were computed using the Maximum Composite Likelihood method (Tamura et al., 2004) and are in the units of the number of base substitutions per site. All positions containing gaps and missing data were eliminated from the dataset (complete deletion option). There was a total of 180 positions in the final dataset. Phylogenetic analyses were conducted in MEGA4 (Tamura et al., 2007). **, Caladenia sources; *, orchid sources; no asterisks, non-orchid sources.