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. 2009 Aug 19;97(4):1148–1157. doi: 10.1016/j.bpj.2009.06.015

Table 1.

Persistence length calculated using different statistical descriptors of the WLC model for various mounting and imaging conditions

Mounting conditions Scored length (nm) (No. molecules) PR2〉 (nm) P〈cos〉 (nm) Pθ2〉 (nm) PD4〉 (nm) Avg. (nm)
2.5 mM NaCl ∼33,000 (210) 30 29 29 29 29
10 mM NaCl ∼70,000 (451) 31 31 33 34 32
50 mM NaCl ∼37,000 (235) 35 31 32 30 32
100 mM NaCl ∼76,000 (490) 25 25 26 25 25
1 mM NaCl, polylysine ∼107,000 (685) 26 23 25 23 24
2.5 mM NaCl, polylysine ∼52,000 (332) 28 26 27 23 26
10 mM KCl, 5 mM MgAc2†,‡ ∼134,000 23 20 22 23 22
10 mM KCl, 5 mM MgAc2†,§ ∼151,000 23 21 24 27 24
10 mM KCl, 5 mM MgAc2†,¶ ∼112,000 21 19 22 26 22
10 mM KCl, 5 mM MgAc2†,‖ ∼1,000,000 89 80 81 66 79
10 mM KCl, 5 mM MgAc2†,∗∗ ∼563,000 101 91 91 76 90

474-bp DNA fragment, deposition onto glow-discharged carbon film, EM data.

474-bp fragment, deposition onto polylysine film, EM data.

Mixture of 1144-bp and 1837-bp fragments, deposition onto glow-discharged carbon film, EM data.

§

2981-bp fragment, deposition onto glow discharged carbon film, EM data.

Mixture of 474-bp and 2507-bp fragments, deposition onto glow-discharged carbon film, EM data.

2981-bp fragment, deposition onto mica, AFM data.

∗∗

Mixture of 474-bp and 2507-bp fragments, deposition onto mica, AFM data.