Table 1.
BIN | BIN name | No. of clones in the BIN | No. of corrected clones | % of corrected clones |
1 | photosynthesis | 494 | 23 | 4.6 |
2 | major CHO metabolism | 165 | 8 | 4.8 |
3 | minor CHO metabolism | 162 | 13 | 8 |
4 | glycolysis | 123 | 9 | 7.3 |
5 | fermentation | 52 | 0 | 0 |
6 | gluconeogenesis/glyoxylate cycle | 22 | 2 | 9 |
7 | oxidative pentose phosphate pathway | 42 | 1 | 2.4 |
8 | TCA cycle/org. acid transformations | 123 | 8 | 6.5 |
9 | mitochondrial electron transport/ATP synthesis | 156 | 4 | 2.6 |
10 | cell wall | 595 | 4 | 0.7 |
11 | lipid metabolism | 495 | 27 | 5.9 |
12 | nitrogen metabolism | 59 | 4 | 6.8 |
13 | amino acid metabolism | 459 | 17 | 3.7 |
14 | sulphur assimilation | 15 | 0 | 0 |
15 | metal handling | 142 | 14 | 9.9 |
16 | secondary metabolism | 543 | 92 | 16.9 |
17 | hormone metabolism | 502 | 29 | 5.8 |
18 | cofactor and vitamin synthesis | 45 | 3 | 6.7 |
19 | tetrapyrrole synthesis | 56 | 14 | 25 |
20 | stress | 948 | 456 | 48.1 |
21 | redox | 282 | 15 | 5.3 |
22 | polyamine metabolism | 18 | 0 | 0 |
23 | nucleotide metabolism | 147 | 6 | 4.1 |
24 | biodegradation of xenobiotics | 24 | 1 | 4.2 |
25 | C1 metabolism | 33 | 0 | 0 |
26 | miscellaneous enzyme families | 1219 | 69 | 5.7 |
27 | RNA | 2296 | 85 | 3.7 |
28 | DNA | 422 | 43 | 10.2 |
29 | protein | 3628 | 157 | 4.3 |
30 | signalling | 1157 | 81 | 7 |
31 | cell | 655 | 12 | 1.8 |
33 | development | 405 | 31 | 7.6 |
34 | transport | 951 | 32 | 3.4 |
35 | 35.1. not assigned. no ontology | 3276 | 437 | 13.3 |
35.2. not assigned. unknown | 15571 | 31 | 0.2 | |
Σ | 35246 | 1728 | 4.9 |