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. Author manuscript; available in PMC: 2010 Apr 9.
Published in final edited form as: J Chem Theory Comput. 2009 Apr 9;5(5):1301–1314. doi: 10.1021/ct9000153

Figure 2.

Figure 2

The progress variable as a function of time in representative BdpA unfolding trajectories generated by TMD, SMD and BMD. The perturbed progress variable is the end-to-end distance (h) in the top panels and the radius of gyration (Rg) in the bottom panels. Insets show close-ups of a small portion of the progression curves.