Table 5.
Frog Virus 3 | Singapore Grouper Iridovirus | ||||
---|---|---|---|---|---|
Gene | ORF No. | This Studyb |
ORF No. | Teng et al. (2008) | Chen et al. (2006) |
Ribonucleotide reductase (RR- β) |
67L | IE-S | 47L | DE | DE |
PCNA | 84R | IE-S | 68L | DE | L |
ICP-46 | 91R | IE-TR | 162L | IE | IE |
vCARD | 64R | IE-TR | 48L | IE | IE |
Ser-Thr protein kinase |
57R | IE-S | 150L | DE | DE |
18 kDa | 82R | IE-S | 86R | IE | IE |
dUTPase | 63R | IE | 49L | DE | DE |
vPol-IIα | 8R | DE | 104L | L | IE |
vPol-IIβ | 62L | DE | 73L | L | DE |
D5-NTPase | 22R | DE | 52L | DE | DE |
Myristylated membrane protein |
53R | DE | 88L | DE | L |
DNA Pol | 60R | DE | 128R | DE | DE |
RNase III | 80L | DE | 84L | IE | L |
RAD2 nuclease | 95R | DE | 97L | DE | L |
TF-IIS | 81R | DE | 85R | L | DE |
Deoxynucleotide kinase |
85R | DE | 17L | DE | IE |
31 kDa | 25R | DE | 6R | DE | DE |
β-HSD | 52L | DE | 3R | DE | DE |
DMTase | 83R | DE | -- c | -- | -- |
RR-α | 38R | DE | 64R | DE | L |
ATPase | 15R | L | 134L | DE | DE |
DNA packaging | 1R | L | 116R | DE | L |
NIF-NLI interacting factor |
37R | L | 61R | L | L |
MCP | 90R | L | 72R | L | L |
EVR1/ALR family |
88R | L | 70R | DE | L |
Temporal class was assigned based on the microarray and RT/qRT-PCR results. Selection of core iridovirus genes was based on studies of Iyer et al., 2006) and Eaton et al., (2007).
Columns 3, 5, and 6 display the temporal class assignment of the indicated viral genes. Highlighted classes are those identified in FV3 and at least one of the SGIV studies.
SGIV does not encode a DNA methyltransferase gene.