Table I. Test set of X-ray/NMR structure pairs used for comparison calculations.
PDB ID | X-ray Resolution (Å) | Number of NMR structures | Residues | Core residuesa | Cluster sites | |||
---|---|---|---|---|---|---|---|---|
X-ray | NMR | Number of core residues | Fraction of total residues | Number of cluster residues | Fraction of total residues | |||
1AGI | 1GIO | 1.5 | 10 | 125 | 76 | 0.61 | 27 | 0.22 |
1BED | 2IJY | 2 | 22 | 181 | 81 | 0.45 | 43 | 0.24 |
1BP2 | 1BVM | 1.7 | 20 | 123 | 65 | 0.53 | 26 | 0.21 |
1C44 | 1QND | 1.5 | 20 | 123 | 71 | 0.58 | 25 | 0.20 |
1CHN | 1DJM | 1.78 | 27 | 126 | 66 | 0.52 | 28 | 0.22 |
1EKG | 1LY7 | 1.8 | 15 | 119 | 71 | 0.60 | 28 | 0.24 |
1FKJ | 1FKR | 1.7 | 20 | 102 | 58 | 0.57 | 21 | 0.21 |
1GNU | 1KOT | 1.75 | 15 | 117 | 57 | 0.49 | 28 | 0.24 |
1GPR | 1AX3 | 1.9 | 16 | 158 | 83 | 0.53 | 38 | 0.24 |
1GSV | 3PHY | 1.75 | 26 | 122 | 65 | 0.53 | 26 | 0.21 |
1HCV | 1G9E | 1.85 | 20 | 116 | 56 | 0.48 | 34 | 0.30 |
1IFB | 1AEL | 1.96 | 20 | 131 | 67 | 0.51 | 30 | 0.23 |
1IFR | 1IVT | 1.4 | 15 | 111 | 64 | 0.58 | 30 | 0.27 |
1J2A | 1CLH | 1.8 | 12 | 159 | 80 | 0.50 | 37 | 0.23 |
1JF4 | 1VRE | 1.4 | 29 | 140 | 79 | 0.56 | 34 | 0.24 |
1KF5 | 2AAS | 1.15 | 32 | 124 | 70 | 0.56 | 30 | 0.24 |
1KM8 | 1BC4 | 1.9 | 15 | 105 | 55 | 0.52 | 17 | 0.16 |
1LDS | 1JNJ | 1.8 | 20 | 97 | 48 | 0.49 | 25 | 0.26 |
1MG4 | 1UF0 | 1.5 | 20 | 101 | 46 | 0.46 | 21 | 0.21 |
1OPC | 2JPB | 1.95 | 20 | 99 | 67 | 0.68 | 19 | 0.19 |
1RRO | 2NLN | 1.3 | 20 | 108 | 53 | 0.49 | 19 | 0.18 |
1UOH | 1TR4 | 2 | 20 | 223 | 81 | 0.36 | 43 | 0.19 |
1WHO | 1BMW | 1.9 | 38 | 89 | 55 | 0.62 | 22 | 0.25 |
1YV6 | 1PU3 | 1.78 | 20 | 103 | 70 | 0.68 | 17 | 0.17 |
2CWR | 2CZN | 1.7 | 38 | 97 | 53 | 0.55 | 27 | 0.28 |
2E1F | 2DGZ | 2 | 20 | 94 | 42 | 0.45 | 16 | 0.17 |
2GRC | 2H60 | 1.5 | 11 | 105 | 50 | 0.48 | 14 | 0.13 |
2SAK | 1SSN | 1.8 | 20 | 121 | 68 | 0.60 | 29 | 0.24 |
2V75 | 2JPS | 1.8 | 45 | 89 | 45 | 0.51 | 17 | 0.19 |
Min | 1.15 | 10 | 89 | 42 | 0.36 | 14 | 0.13 | |
Max | 2 | 45 | 223 | 83 | 0.68 | 43 | 0.29 | |
Mean | 1.72 | 21.59 | 120.97 | 63.52 | 0.53 | 26.59 | 0.22 | |
Std. dev. | 0.22 | 8.18 | 29.07 | 11.86 | 0.07 | 7.76 | 0.04 |
as defined by FindCore (Snyder, Montelione 2005)