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Power and ANFP under the condition that causal SNPs are correlated with thousands of SNPs in the data
| Method | Power Sample size = 400 |
ANFP | Total SNPs | ||
|---|---|---|---|---|---|
| SNP 1 R2=10.4% | SNP 2 R2=5.2% | SNP 3 R2=5.6% | |||
| Bonferroni(α = 4.3×10−7) | 92% | 21% | 21% | 31.74 | 115,182 |
| FDR (q=0.05) | 97% | 66% | 76% | 2075 | 115,182 |
| FDR (q = 0.001) | 75% | 20% | 21% | 57 | 115,182 |
| MFMR (α = 10−4) | 85% | 33% | 33% | 13.25 | 115,182 |
| MFMR (α = 0.05) | 88% | 37% | 34% | 48 | 115,182 |
