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. 2009 Aug 6;2:50. doi: 10.1186/1755-8794-2-50

Table 1.

List of most differentially regulated genes in 4OHT-treated K13 ER-HUVECs.

Gene Name Gene Entrez Gene Fold Change
Up-regulated genes

1 chemokine (C-C motif) ligand 2 CCL2 6347 71.4
2 ubiquitin D UBD 10537 58.4
3 chemokine (C-C motif) ligand 20 CCL20 6364 53.1
4 chemokine (C-C motif) ligand 5 CCL5 6352 48.3
5 chemokine (C-X-C motif) ligand 10 CXCL10 3627 47.7
6 vascular cell adhesion molecule 1 VCAM1 7412 46.0
7 selectin E (endothelial adhesion molecule 1) SELE 6401 35.4
8 superoxide dismutase 2, mitochondrial SOD2 6648 35.2
9 chemokine (C-X-C motif) ligand 3 CXCL3 2921 33.8
10 chemokine (C-X-C motif) ligand 2 CXCL2 2920 32.2
11 interleukin 8 IL8 3576 31.5
12 chromosome 15 open reading frame 48 C15orf48 84419 29.6
13 solute carrier family 7 (cationic amino acid transporter) SLC7A2 6542 23.2
14 chemokine (C-X3-C motif) ligand 1 CX3CL1 6376 22.3
15 intercellular adhesion molecule 1 (CD54) ICAM1 3383 22.2
16 tumor necrosis factor, alpha-induced protein 6 TNFAIP6 7130 21.2
17 interleukin 6 (interferon, beta 2) IL6 3569 21.1
18 colony stimulating factor 2 (granulocyte-macrophage) CSF2 1437 15.1
19 interferon stimulated exonuclease gene 20 kDa ISG20 3669 13.6
20 chemokine (C-X-C motif) ligand 5 CXCL5 6374 13.0
21 laminin, gamma 2 LAMC2 3918 12.7
22 tumor necrosis factor, alpha-induced protein 3 TNFAIP3 7128 12.5
23 matrix metallopeptidase 10 (stromelysin 2) MMP10 4319 11.5
24 tumor necrosis factor, alpha-induced protein 2 TNFAIP2 7127 11.3
25 Epstein-Barr virus induced gene 3 EBI3 10148 9.8
26 tumor necrosis factor (ligand) superfamily, member 13b TNFSF13B 10673 9.6
27 phospholipase A1 member A PLA1A 51365 9.4
28 GTP cyclohydrolase 1 (dopa-responsive dystonia) GCH1 2643 9.0
29 nuclear factor of kappa light polypeptide gene enhancer, alpha NFKBIA 4792 8.3
30 proteasome (prosome, macropain) subunit, beta type, 9 PSMB9 5698 7.9
31 Chemokine (C-X-C motif) 1 CXCl1 2919 7.7
32 histone cluster 2, H2aa3 HIST2 723790 7.5
33 HLA-G histocompatibility antigen, class I, G HLA-G 3135 7.2
34 hydroxysteroid (11-beta) dehydrogenase 1 HSD11B1 3290 7.2
35 chemokine (C-X-C motif) receptor 7 CXCR7 57007 7.0
36 major histocompatibility complex, class I, B HLA-B 3106 6.3
37 nuclear receptor coactivator 7 NCOA7 135112 6.1
38 myxovirus (influenza virus) resistance 2 (mouse) MX2 4600 5.8
39 radical S-adenosyl methionine domain containing 2 RSAD2 91543 5.6
40 TNFAIP3 interacting protein 1 TNIP1 10318 5.5
41 tissue factor pathway inhibitor 2 TFPI2 7980 5.4
42 interleukin 32 IL32 9235 5.3
43 Nibrin NBN 4683 5.2
44 receptor (chemosensory) transporter protein 4 RTP4 64108 5.2
45 baculoviral IAP repeat-containing 3 BIRC3 330 5.1
46 interleukin 7 receptor /// interleukin 7 receptor IL7R 3575 5.0
47 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) TAP1 6890 5.0
48 papilin, proteoglycan-like sulfated glycoprotein PAPLN 89932 4.9
49 Major histocompatibility complex, class I, F HLA-F 3134 4.9
50 myosin, light chain kinase MYLK 4638 4.9

Down-regulated genes

1 extracellular link domain containing 1 XLKD1 10894 11.1
2 chemokine (C-C motif) ligand 14 CCL14 6358 11.0
3 ADAM metallopeptidase with thrombospondin type 1 motif, 18 ADAMTS18 170692 7.8
4 LIM domain binding 2 LDB2 9079 6.7
5 keratin 18 KRT18 3875 5.3
6 dual specificity phosphatase 4 DUSP4 1846 5.3
7 ribonuclease, RNase A family, 1 (pancreatic) RNASE1 6035 4.7
8 periostin, osteoblast specific factor POSTN 10631 4.7
9 insulin-like growth factor binding protein 5 IGFBP5 3488 4.6
10 regulator of G-protein signalling 5 RGS5 8490 4.6
11 uroplakin 1B /// regulator of G-protein signalling 5 UPK1B 7348 4.5
12 regulator of G-protein signalling 4 RGS4 5999 5.5
13 Palmdelphin PALMD 54873 3.8
14 latent transforming growth factor beta binding protein 2 LTBP2 4053 3.2
15 C-X-C chemokine receptor type 4 CXCR4 7852 3.1