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. 2008 Sep 12;168(8):878–889. doi: 10.1093/aje/kwn208

Table 8.

Results From Likelihood Ratio Testing for Goodness of Model Fit in a Comparison of the Restricted Models A–D (See Text) With the General Error Model, Showing the Number of Observed Genotype Pairs and the Number of Discordant Genotype Pairs As Expected Under the Various Error Models

Model No. of Discordant Genotype Pairs (r02, r01, r12)a No. of Parameters Log-Likelihood λ for Comparison with General Modelb Degrees of Freedom P Value
Observed 20, 123, 67
General model (model A) 21.5, 122.5, 64.4 6 −46,768.5
Zero-corner model (model B) 0.2, 146.3, 87.4 4 −46,834.1 131.2 2 <10−3
Symmetrical model (model C) 19.9, 122.1, 68.1 3 −46,772.1 7.2 3 0.07
Allele-independent model (model D) 0.1, 168.7, 61.0 1 −46,861 185 5 <10−3
a

No. of parameters in restricted model; r02, r01, and r12 refer to the notation in Table 1.

b

With λ = −2 × (ln Lrestricted − ln Lgeneral) ∼ χdf2 (6 df).