Table 2.
Gene. Symbol | Gene Title | Mean FC* | q-value** | Representative functions |
---|---|---|---|---|
MHC2TA | Major histocompatibility complex, class II, transactivator | 1.23 | 0.029 | Master of regulator of MHC class II genes [51] |
IRF1 | Interferon regulatory factor 1 | 1.45 | 0.002 | Nuclear factor and a transcriptional factor for type I IFN [52], can induce CDKN1A activity |
WARS | Tryptophanyl-tRNA synthetase | 1.72 | 0.001 | Antagonist of VEGF [53] |
PSMB9 | Proteasome subunit, beta-type, 9 | 1.42 | 0.002 | Transport protein into the endoplasmic reticulum, important in MHC class I regulation [54] |
CD64 | Fc fragment of IgG, high affinity | 3.14 | 0.029 | Fc fragment of IgG receptor, expressed on human monocytes and macrophages [55] |
CXCL9 | Chemokine CXC motif, ligand 9 | 1.16 | 0.029 | T-cell chemoattractant |
PIM1 | Oncogene PIM1 | 1.39 | 0.009 | Protooncogene in prostate cancer and hematopoietic malignancies [56] |
CCND1 | Cyclin D1 | 1.16 | 0.029 | Function as an oncogene, related to lymphoma, leukemia [57], parathyroid tumor [58], and colorectal cancer [59] |
CDKN1A | Cyclin-dependent kinase inhibitor 1A | 1.36 | 0.029 | Inhibitor of protein kinase, CDK1 |
A2M | Alpha-2-macroglobulin | 1.15 | 0.029 | Major plasma proteinase inhibitor |
OPRM-1 | Opioid receptor, mu-1 | 1.15 | 0.029 | Pain-related gene |
MT1E | Metallothionein 1E | 1.31 | 0.012 | Heavy metal-binding protein, Zn and Cu homeostasis |
TRH | Thyrotropin-releasing hormone deficiency | 1.14 | 0.029 | Major hypothalamic mediator of thyroid stimulating hormone release |
Fold change,
the maximum q-value in case of multiple probe sets