Table 1.
Fpg/Nei DNA glycosylase orthologs present in the order Actinomycetales, including mycobacterial species
| Fpg/Nei orthologs |
|||||
|---|---|---|---|---|---|
| Species | Putative Fpg | Putative Fpg | Putative Nei | Putative Nei | Putative Fpg/Nei? |
| M. leprae TN | ML1658 | – | – | – | – |
| M. tuberculosis CDC1551 | MT2994 | MT0970 | MT2539 | MT3396 | – |
| M. tuberculosis H37Rv | Rv2924c* | Rv0944 | Rv2464c | Rv3297 | – |
| M. bovis AF2122/97 | Mb2949c | Mb0969 | Mb2491C | Mb3325 | – |
| M. marinum | MM1783 | MM4559 | MM3812 | MM1237 | – |
| M. ulcerans | MUL2031 | MUL3737 | MUL2650 | MUL4418 | – |
| M. avium 104 | MAV3782 | MAV3149 | MAV1066 | MAV1708 | – |
| M. avium ssp. paratuberculosis K10 | MAP2994c | MAP0889 | MAP2284c | MAP3416 | MAP1328c |
| M. smegmatis mc2 155 | SMEG2419 | SMEG4683 | SMEG5545 | SMEG1756 | – |
| Streptomyces avermitilis MA-4680 | SAV2664 | SAV7289 | SAV2501 | SAV5427 | – |
| Streptomyces coelicolor A3(2) | SCO0945 | SCO5573 | SCO2626 | SCO5760 | – |
| Corynebacterium efficiens YS-314 | CE1975 | CE2834 | CE0922 | – | – |
| Corynebacterium glutamicum | NCg10813 | NCg11993 | NCg12898 | – | – |
| Corynebacterium diphtheriae | DIP1543 | DIP0829 | DIP2304 | – | – |
| Leifsonia xyli ssp. xyli str. CTCB07 | Lxx00140 | Lxx09800 | Lxx20840 | Lxx08780 | – |
| Nocardia farcinica | Nfa13280 | Nfa41830 | NFA50200 | NFA9770 | – |
| Propionibacterium acnes KPA171202 | PPA1451 | PPA1623 | – | – | – |
| Tropheryma whippeli TW08/27 | TW374 | – | – | – | – |
| Tropheryma whippeli str. Twist | TW396 | – | – | – | – |
| Bifidobacterium longum NCC2705 | – | – | – | – | – |
| E. coli† | MutM | – | Nei | – | – |
*
Now termed Mtb-Fpg1.
†
Included as a reference strain.
–, none.