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. Author manuscript; available in PMC: 2009 Sep 16.
Published in final edited form as: Circulation. 2008 Sep 2;118(12):1259–1267. doi: 10.1161/CIRCULATIONAHA.108.770669

Table 2.

Differentially expressed HDL3 proteins detected by spectral counting.

Protein
Identification
Number1
Protein Name CAD2 CAD +
Niacin/Statin2
Average Ratio
(on therapy to
off therapy) 3
P value
IPI00022733 PLTP 0 3.0 (2.7) >3 0.02
IPI00480119 Apolipoprotein F 3.8 (1.1) 5.2 (0.75) 1.4 0.005
IPI00291262 Clusterin
(Apolipoprotein J)
0.3 (0.8) 1.8 (2.2) 6.2 0.12
IPI00021842 Apolipoprotein E 15 (3.5) 11 (2.1) 0.74 0.002
IPI00021856 Apolipoprotein C-
II
15 (5.5) 11 (4.2) 0.80 0.13
IPI00021841 Apolipoprotein A-I 242 (48) 257 (45) 1.08 0.43
1

Protein identification numbers are from the International Protein Index database, v3.01.

2

Numbers shown are total number of peptides identified (SD) for spectral counting.

3

Average ratios were calculated from the individual ratio for each protein for each subject at baseline and at 1 yr niacin/statin therapy.