Skip to main content
. 2009 Jul 6;113(30):10465–10471. doi: 10.1021/jp904562q

Table 2. Summary of the Restraints Employed for the Final Ensemble of 80 Retained Structures from 200 Calculated Structuresa.

structure calculation parameter apelin-17 with SDS apelin-17 in bufferb
total rounds of NOE refinement 8 12
unique NOE restraints    
total 522 285
intraresidue 248 146
sequential 188 108
medium range (|ij| ≤ 4) 46 22
long range (|ij| > 4) 0 0
ambiguous 40 9
Ramachandran plot statistics    
core 33% 26%
allowed 51% 52%
generously allowed 10% 10%
disallowed 6% 13%
number of type I β-turns 45 9
number of type IV β-turns 274 123
number of type VIII β-turns 6 10
XPLOR-NIH energies (kcal/mol)    
total 26.9 ± 2.1 45.14 ± 5.39
NOE 4.6 ± 1.0 0.60 ± 0.49
violations    
NOE violations >0.5 Å 0 0
NOE violations of 0.3−0.5 Å 1 0
NOE violations of 0.2−0.3 Å 4 4
a

Classification of NOE restraints using CYANA, LA Systems, Tokyo, Japan. XPLOR-NIH energies and average deviations and violation occurrences calculated using an in-house tcl/Tk script. Structural statistics for apelin-17 in buffer at 35 °C are shown for comparison.

b

Previously reported data.(15)