TABLE 1.
Clinical isolates, origins, epidemiological features, and exploration by PCR mapping
| Strain | Reference | Collection yr | Country of origin (city, hospital)a | PCR profile | CMY plasmid transferb | Replicon typing | CMY type | PCRe
|
|||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| A | B | C | D | E | F | G | H | I | J | K | L | ||||||||
| S. enterica serovar Senftenberg SENF | 13 | 1994 | Algeria | ND | Tc E. coli C1a Nalr | A/C | 2 | + | + | + | − | − | + | + | + | + | − | − | − |
| K. pneumoniae 169 | 7 | 1999 | France (Paris, H2) | Wc | Tc E. coli J53 | A/C | 2 | + | + | + | − | − | + | + | + | + | − | − | − |
| K. pneumoniae BM2974 | 4 | 1998 | Sweden | Xc | Tc E. coli J53 | A/C | 4 | +del | +del | +del | − | − | + | + | + | + | − | − | − |
| K. pneumoniae LMCMY | This study | France (Colombes, H3) | Yc | Tc E. coli J53 | A/C | 2 | + | + | + | − | − | + | + | + | + | − | − | − | |
| K. pneumoniae 9701 | 7 | 1997 | France (Paris, H1) | Zc | Tc E. coli J53 | A/C | 4 | +ins | +ins | +ins | − | − | + | + | + | + | − | − | − |
| P. mirabilis H223b | 21 | 1996 | Tunisia | ND | Tc E. coli J53 | A/C | 4 | + | + | + | − | − | + | + | + | + | − | − | − |
| P. mirabilis RPCMY | This study | 2002 | France (Garches, H6) | ND | Tc E. coli J53 | Negative | 2 | − | − | + | − | − | + | + | + | + | + | + | − |
| E. coli TN2106 | This study | 2003 | France (Paris, H4) | Ad | Tc E. coli J53 | A/C | 2 | + | + | + | − | − | + | + | + | − | − | − | − |
| E. coli TN38148 | This study | 2004 | France (Paris, H4) | Ad | Tc E. coli J53 | I1 | 2 | − | − | + | + | + | + | − | − | − | − | − | + |
| E. coli TN10 | This study | 2002 | France (Paris, H4) | Bd | Tc E. coli J53 | I1 | 2 | − | − | + | + | + | + | − | − | − | − | − | + |
| E. coli TN13 | 9 | 2002 | France (Paris, H4) | Cd | Ep E. coli DH10B | I1 | 2 | − | − | + | + | + | + | − | − | − | − | − | + |
| E. coli TN386 | This study | 2002 | France (Paris, H4) | Ad | Tc E. coli J53 | I1 | 2 | − | − | + | + | + | + | − | − | − | − | − | + |
| E. coli IGR4801 | This study | 2005 | France (Villejuif, H5) | Dd | Tc E. coli C600 | Negative | 2 | − | − | + | + | + | + | − | − | − | − | − | + |
| E. coli IGR4872 | This study | 2005 | France (Villejuif, H5) | Ed | Tc E. coli C600 | Negative | 2 | − | − | + | + | + | +ins | − | − | − | − | − | +ins |
| E. coli TN44889 | This study | 2004 | France (Paris, H4) | Fd | NT | ND | 2 | − | + | + | − | − | − | − | − | − | − | − | − |
a
H1, Hôpital Cochin; H2, Hôpital Saint-Antoine; H3, Hôpital Louis Mourier; H4, Hôpital Tenon; H5, Institut Gustave Roussy; H6, Hôpital Raymond Poincaré.
b
Abbreviations: Tc, transconjugant; Ep, transformant; NT, no transfer; ND, not determined.
c
Enterobacterial repetitive intergenic consensus PCR profile.
d
Repetitive-element PCR profile.
e
−, negative; +, positive; +ins, positive with an insertion; +del, positive with a deletion.