TABLE 1.
Primers used in this study
| Primer name | Sequence (5′ → 3′) |
|---|---|
| PrtT outer 5′ | ATGGCGCGCCGCACTGATCTCGTCCTATCGGTT |
| PrtT outer 3′ | ATGGCGCGCCCTAAAGTCTCCTACCTACCTCAG |
| Hyg 5′ | ATAAGCTTGTCGACAGAAGATGATAT |
| Hyg 3′ | ATAAGCTTGCTCTCCCTTATGCGACTCCTGCA |
| PrtT up 3′ | AGTGACAGAACAGGCGACAG |
| pAN-8.1 NdeI 5′ | ATCATATGGAATTCCCTTGTATCTCTACACAC |
| pAN-8.1 NdeI 3′ | TGCACCATATGCGGTGTGAAATA |
| gpdA 5′ | TCTCCAACGTTCTTGCACC |
| gpdA 3′ | CCACTCGTTGTCGTACCAGG |
| prtT inner 5′ | GGTGATAGCGAAACAGAAGAGACAAG |
| prtT inner 3′ | ATAGACTCCACTGGTAGTTAGGTGTTCTG |
| AFUA_8G07080 (Mep) 5′ | AACTTTGCCACTCCTCCTGA |
| AFUA_8G07080 (Mep) 3′ | GCCGTGCTTATCGATCAAAT |
| AFUA_4G11800 (Alp1) 5′ | GCATCAATGTCAACCACGTC |
| AFUA_4G11800 (Alp1) 3′ | CATCGAAAGCGTTCTCAACA |
| AFUA_6G00310 (CpdS) 5′ | AGCTGGTTCAAGCACTTCGT |
| AFUA_6G00310 (CpdS) 3′ | TGAAGGGCTTTTTGGACATC |
| AFUA_4G09320 (DppIV) 5′ | AAGGCCTACATTGCCTCAGA |
| AFUA_4G09320 (DppIV) 3′ | CTCCTCGTACAACCTCTTGG |
| AFUA_2G17330 5′ | CACCGAGGCCATTGTAGATT |
| AFUA_2G17330 3′ | TAACCCCAGACGATTTTTGC |
| AFUA_7G06220 5′ | TACTATCGGGGCCAGTTACG |
| AFUA_7G06220 3′ | AGAGAGCTCCTGGGTTGGAT |
| AFUA_4G03790 5′ | ATCCTGGCTCAGTCTGCTGT |
| AFUA_4G03790 3′ | CGAACGTCCTTTTGTTGGAT |