TABLE 1.
Motif sequences in HIV and SIV strainsa
Unique Vif sequence | % that contain each motif variant
|
||||
---|---|---|---|---|---|
HIV-1 (2,683) | HIV-2 (27) | SIVcpz (113) | SIVmac (32) | SIVagm (9) | |
W K S L V K | 43.6 | 0.0 | 0.9 | 0.0 | 0.0 |
W N S L V K | 47.4 | 0.0 | 20.4 | 0.0 | 0.0 |
W H S L V K | 4.3 | 74.1 | 6.2 | 0.0 | 0.0 |
W H S L I K | 0.0 | 22.2 | 40.7 | 90.6 | 11.1 |
W x S L V K | 1.0 | 0.0 | 2.7 | 0.0 | 11.1 |
W Q G I V K | 0.0 | 0.0 | 0.9 | 0.0 | 11.1 |
W x G I V K | 0.0 | 0.0 | 0.9 | 0.0 | 11.1 |
W x G I V R | 0.0 | 0.0 | 0.9 | 0.0 | 11.1 |
W x G I V x | 0.0 | 0.0 | 0.9 | 0.0 | 11.1 |
Total | 96.3 | 96.3 | 74.5 | 90.6 | 66.7 |
Vif sequences from the indicated virus strains were identified in GenBank and analyzed for the presence of the motifs as shown.