Table 3.
PDB | Protein | Δoopa | B2ub | B1u | A2u | Eg(x) | Eg(y) | A1u | Ref. |
---|---|---|---|---|---|---|---|---|---|
1U55 | Tt WT A | 1.59 | −1.07 | −1.11 | −0.1 | −0.10 | 0.24 | −0.03 | (14) |
1U55 | Tt WT B | 1.11 | −0.65 | −0.79 | 0.32 | −0.24 | 0.02 | −0.03 | (14) |
1U4H | Tt WT A | 1.59 | −1.09 | −1.09 | −0.02 | −0.30 | 0.11 | −0.06 | (14) |
1U4H | Tt WT B | 1.60 | −1.00 | −1.20 | 0.10 | −0.15 | 0.14 | −0.06 | (14) |
Heme A | Tt I5L | 1.28 | −0.93 | 0.73 | −0.11 | −0.18 | 0.40 | −0.02 | c |
Heme B | Tt I5L | 1.23 | −0.81 | −0.81 | 0.13 | −0.31 | 0.14 | −0.02 | c |
3EEE | Tt P115A A | 0.90 | −0.40 | −0.77 | 0.04 | −0.17 | 0.02 | 0.00 | (20) |
3EEE | Tt P115A B | 0.82 | −0.50 | −0.61 | 0.03 | −0.11 | 0.03 | 0.01 | (20) |
3EEE | Tt P115A C | 0.54 | −0.04 | −0.49 | −0.09 | −0.16 | −0.08 | 0.01 | (20) |
3EEE | Tt P115A D | 0.62 | 0.07 | −0.52 | −0.03 | −0.25 | −0.18 | 0.01 | (20) |
Heme A | Tt I5L/P115A | 0.85 | −0.53 | 0.05 | −0.16 | −0.05 | 0.52 | −0.04 | c |
Heme B | Tt I5L/P115A | 0.74 | −0.63 | 0.17 | −0.02 | 0.01 | 0.32 | −0.08 | c |
1DP6 | Bj FixLd | 0.60 | 0.44 | −0.32 | 0.18 | 0.01 | 0.11 | −0.03 | (26) |
1A6M | Sw Mbe | 0.36 | 0.19 | 0.01 | 0.22 | −0.05 | 0.19 | 0.07 | (28) |
1ASH | As Hbf | 0.47 | −0.11 | 0.41 | 0.08 | −0.11 | 0.07 | −0.01 | (29) |
1IDR | tHb Ag | 0.58 | −0.13 | 0.33 | 0.28 | −0.25 | −0.19 | 0.04 | (27) |
1IDR | tHb Bg | 0.55 | 0.15 | 0.45 | 0.01 | 0.05 | −0.21 | −0.04 | (27) |
Total out-of-plane displacement (Å) from the complete basis set
Reported displacements for each symmetry type are from the minimal basis set
unpublished experiments, Olea et al.
O2-sensing FixL domain of Bradyrhizobium japonicum
Sperm whale myoglobin
Ascaris suum hemoglobin domain I
Truncated hemoglobin N from Mycobacterium tuberculosis