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. 2009 Aug 21;10:389. doi: 10.1186/1471-2164-10-389

Table 3.

Putative major QTL and their genetic effects on whole cocoon weight and related traits from BC1M of JL (100 replicates)

Trait QTL Chr.1 Position (cM) LOD2 Additive effect r2 (%) Power 3 (%)
Cocoon weight Q1 1 41.81 15.49 0.35 29.38 100
21 12.01 2.68 -0.18 6.68 7
Q2 23 32.01 2.94 0.14 5.19 28
Q3-14 23 41.61 3.15 0.15 5.54 28

Cocoon shell weight Q1 1 41.81 14.85 0.05 27.75 92
22 18.01 3.31 0.03 8.71 6
Q4 23 51.61 3.30 0.02 5.23 49

Cocoon shell ratio Q5 18 6.01 2.77 1.21 6.54 96
Q6 19 2.01 3.89 1.36 8.28 100

Pupal weight Q1 1 41.81 14.64 0.30 27.96 100
Q2 23 32.01 2.91 0.12 5.23 29
Q3-24 23 39.61 3.03 0.12 5.27 29

1 Chromosome

2 The thresholds of LOD for CW, CSW, CSR, and PW were 2.67, 2.69, 2.54, and 2.78, respectively.

3 The statistical power represents the detected number of LOD values that were > 2 in 100 random replicates by multi-marker joint analysis.

4 Q3-1 possesses an extremely similar LOD value (LOD = 3.02) for PW to Q3-2. In addition, their similar effects (r2 of 13.95 and 13.94%) and close positions (2 cM) indicate that they may share the same region.