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. Author manuscript; available in PMC: 2009 Sep 12.
Published in final edited form as: J Comput Chem. 2005 Dec;26(16):1752–1780. doi: 10.1002/jcc.20292

Table 1.

RMS Energy Deviations (kcal/mol) from LMP2/cc-pVTZ(-f)//HF/6-31G** for Peptides.

Peptide Original OPLS-AAa PFF OPLS-AA/La MMFF94a
Tetrapeptide
 Alanine 1.47 0.81 0.56
Dipeptides
 Alanine 0.43 0.20 0.27
 Serine 0.47 0.16 0.44/0.34 0.97
 Phenylalanine 0.35 0.05 0.15 0.21
 Cysteine 1.91 0.31 0.35 1.21
 Asparagine 1.30 0.19 0.16 2.25
 Glutamine 0.98 0.69 0.96 1.00
 Histidine 0.79 0.90 0.96/0.72 1.60
 Leucine 0.37 0.57 0.34/0.38 1.27
 Isoleucine 0.88 1.04 0.38 0.66
 Valine 0.39 0.14 0.08/0.16 1.01
 Methionine 1.00 0.59 0.59 1.05
 Proline 2.25 0.76 1.54
 Tryptophan 0.56 0.63 0.50 0.83
 Threonine 0.77 0.61 0.87 1.15
 Tyrosine 0.35 0.25 0.39 0.28
Averageb 0.81 0.55 0.47 1.04
a

From ref. 8.

b

Proline not included.