Table 1.
Peptide | Original OPLS-AAa | PFF | OPLS-AA/La | MMFF94a |
---|---|---|---|---|
Tetrapeptide | ||||
Alanine | 1.47 | 0.81 | 0.56 | |
Dipeptides | ||||
Alanine | 0.43 | 0.20 | 0.27 | |
Serine | 0.47 | 0.16 | 0.44/0.34 | 0.97 |
Phenylalanine | 0.35 | 0.05 | 0.15 | 0.21 |
Cysteine | 1.91 | 0.31 | 0.35 | 1.21 |
Asparagine | 1.30 | 0.19 | 0.16 | 2.25 |
Glutamine | 0.98 | 0.69 | 0.96 | 1.00 |
Histidine | 0.79 | 0.90 | 0.96/0.72 | 1.60 |
Leucine | 0.37 | 0.57 | 0.34/0.38 | 1.27 |
Isoleucine | 0.88 | 1.04 | 0.38 | 0.66 |
Valine | 0.39 | 0.14 | 0.08/0.16 | 1.01 |
Methionine | 1.00 | 0.59 | 0.59 | 1.05 |
Proline | 2.25 | 0.76 | 1.54 | |
Tryptophan | 0.56 | 0.63 | 0.50 | 0.83 |
Threonine | 0.77 | 0.61 | 0.87 | 1.15 |
Tyrosine | 0.35 | 0.25 | 0.39 | 0.28 |
Averageb | 0.81 | 0.55 | 0.47 | 1.04 |
From ref. 8.
Proline not included.