Table 2. Distribution of relatively common HLA-A, -B, -C, and -DRB1 variants in similar case-control populations studied here (this study, N = 298) and elsewhere (N = 312).
HLA-A allele frequency | HLA-B allele frequency | HLA-C allele frequency | HLA-DRB1 allele frequency | ||||||||
Alleles | Elsewhere | This study | Alleles | Elsewhere | This study | Alleles | Elsewhere | This study | Alleles | Elsewhere | This study |
A*01 | 0.172 | 0.171 | B*07 | 0.130 | 0.128 | Cw*01 | 0.032 | 0.022 | *01 | 0.104 | 0.106 |
A*02 | 0.289 | 0.310 | B*08 | 0.096 | 0.111 | Cw*02 | 0.045 | 0.052 | *03 | 0.131 | 0.114 |
A*03 | 0.111 | 0.141 | B*13 | 0.019 | 0.032 | Cw*03 | 0.131 | 0.153 | *04 | 0.149 | 0.161 |
A*11 | 0.069 | 0.057 | B*14 | 0.042 | 0.018 | Cw*04 | 0.112 | 0.111 | *07 | 0.117 | 0.134 |
A*23 | 0.034 | 0.020 | B*15 | 0.074 | 0.081 | Cw*05 | 0.080 | 0.086 | *08 | 0.035 | 0.040 |
A*24 | 0.083 | 0.079 | B*18 | 0.055 | 0.052 | Cw*06 | 0.088 | 0.109 | *09 | 0.010 | 0.008 |
A*25 | 0.022 | 0.025 | B*27 | 0.037 | 0.042 | Cw*07 | 0.293 | 0.310 | *10 | 0.013 | 0.012 |
A*26 | 0.034 | 0.022 | B*35 | 0.093 | 0.087 | Cw*08 | 0.050 | 0.017 | *11 | 0.103 | 0.092 |
A*29 | 0.039 | 0.025 | B*37 | 0.018 | 0.027 | Cw*12 | 0.066 | 0.070 | *12 | 0.018 | 0.018 |
A*30 | 0.030 | 0.022 | B*38 | 0.018 | 0.013 | Cw*14 | 0.016 | 0.008 | *13 | 0.141 | 0.121 |
A*31 | 0.018 | 0.017 | B*40 | 0.067 | 0.082 | Cw*15 | 0.040 | 0.022 | *14 | 0.026 | 0.027 |
A*32 | 0.026 | 0.050 | B*44 | 0.130 | 0.153 | Cw*16 | 0.034 | 0.030 | *15 | 0.135 | 0.149 |
A*33 | 0.018 | 0.005 | B*49 | 0.021 | 0.008 | Cw*17 | 0.011 | 0.010 | *16 | 0.019 | 0.017 |
A*68 | 0.050 | 0.045 | B*51 | 0.058 | 0.042 | Others | 0.002 | 0 | |||
Others | 0.008 | 0.011 | B*52 | 0.016 | 0.020 | ||||||
B*55 | 0.037 | 0.010 | |||||||||
B*57 | 0.027 | 0.042 | |||||||||
Others | 0.064 | 0.049 |
Previously studied population consists of European Americans from the San Francisco Bay area [16]. Rare alleles at each locus are grouped together (others), with number of chromosomes (2N) used as the denominator in all tabulations. Between study populations, statistically significant differences (p≤0.025) are seen with A*32, B*14, B*55, and Cw*08.