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. Author manuscript; available in PMC: 2010 Jun 1.
Published in final edited form as: Eur J Med Chem. 2008 Oct 9;44(6):2626–2631. doi: 10.1016/j.ejmech.2008.09.042

Table 1.

Thermodynamic and kinetic parameters for the interaction of the organic activators with plasma antithrombin at pH 7.4, I 0.15, 25 °C.

KD,OBS(μM)a ΔFMAX(%)a ΔG° (kcal/mol) kACT(M1s1) Accelerationb

IAS5 320±10c −1.3±0.2 4.8±0.2 69,780±580 30
IES5 805±70 −1.2±0.2 4.2±0.4 6160±240 2.7
IES4 330±20 −1.4±0.2 4.8±0.3 10860±480 4.7
IAS4 >1000d na na 5,370e 2.3e
a

Measured spectrofluorometrically using a saturable decrease in intrinsic tryptophan fluorescence (λEM = 340 nm) due to the binding of the organic activator to plasma antithrombin. See ‘Experimental Procedures’ for details.

b

Represents the ratio of second-order rate constant of antithrombin inhibition of factor Xa in the presence of organic activator (kACT) to that in its absence (kUNCAT). The kUNCAT value for pH 7.4 buffer used in calculations was 2300 M−1s−1, as reported previously.10

c

Errors represent ±1 S.E.

d

This value was not possible to measure accurately because of insufficient saturation of antithrombin.

e

Estimated on the assumption that KD is 1,000 μM.