Table 2.
QPCR results of verification group 1
| Gene | Cytoband | t-test | Sign. | FC | Earlier suggested by |
| ACD | 16q22.1 | 0.1029 | n.s. | 4 | |
| ACP1 | 2p25 | 0.0023 | ** | 4 | |
| ATBF1 | 16q22.3 | 1.70E-05 | *** | 9 | |
| BRSK2 | 11p15.5 | 2.40E-04 | *** | 21 | |
| C2orf25 | 2q23.3 | 0.0929 | n.s. | 3 | |
| C5orf13 | 5q22.1 | 0.0102 | * | 4 | |
| CACNA2D3 | 3p21.1 | 0.0019 | ** | 133 | [31] |
| CBFB | 16q22.1 | 2.04E-05 | *** | 9 | |
| CCND1 | 11q13 | 0.0012 | ** | 6 | |
| CDC5L | 6p21 | 0.0072 | ** | 15 | |
| CHCHD2 | 7p11.2 | 0.0041 | ** | 4 | |
| CLASP1 | 2q14.2-q14.3 | 0.0021 | ** | 12 | |
| CNTNAP2 | 7q35-q36 | 0.0011 | ** | 287 | |
| CXXC4 | 4q24 | 0.0350 | * | 10 | |
| DBH | 9q34 | 0.0039 | ** | 15 | [15,32] |
| DCUN1D2 | 13q34 | 0.0027 | ** | 26 | |
| DCX | Xq22.3-q23 | 0.0091 | ** | 9 | |
| DDC | 7p11 | 0.0156 | * | 24 | [32,33] |
| DGUOK | 2p13 | 0.0047 | ** | 10 | |
| DPYSL3 | 5q32 | 0.0100 | ** | 23 | [33] |
| EIF2S3 | Xp22.11 | 0.0024 | ** | 4 | |
| FLJ20323 | 7p21.3 | 0.0015 | ** | 10 | |
| FSCN1 | 7p22 | 0.0091 | ** | 4 | |
| FSD1 | 19p13.3 | 0.0077 | ** | 8 | |
| FUS | 16p11.2 | 0.0350 | * | 15 | |
| FUSIP1 | 1p36.11 | 0.0128 | * | 22 | |
| GATA2 | 3q21.3 | 0.0260 | * | 4 | [32] |
| GATA3 | 10p15 | 0.0018 | ** | 6 | [15] |
| GDF1; LASS1 | 19p12 | 0.0409 | * | 10 | |
| GNB1 | 1p36.33 | 0.0028 | ** | 10 | [15,32] |
| H3F3B | 1q41 | 0.0057 | ** | 4 | |
| HDAC2 | 6q21 | 0.0036 | ** | 11 | |
| HNRPDL | 4q21.22 | 0.0025 | ** | 7 | |
| HNRPH3 | 10q22 | 0.0086 | ** | 7 | |
| IDH2 | 15q26.1 | 0.0023 | ** | 6 | |
| ILF2 | 1q21.3 | 0.0161 | * | 6 | |
| ISL1 | 5q11.2 | 0.0074 | ** | 6 | |
| ITGAE | 17p13 | n.d. | n.d. | n.d. | |
| KIAA0408 | 6q22.33 | 3.96E-04 | *** | 15 | |
| KIDINS220 | 2p24 | 0.0014 | ** | 15 | |
| LOC440434 | 17q12 | 0.0264 | * | 11 | |
| MAOA | Xp11.3 | 0.0105 | * | 12 | |
| MARCKSL1 | 1p35.1 | 0.0107 | * | 5 | |
| MCM6 | 2q21 | 0.0301 | * | 5 | |
| MCG12760 | 1p36.13 | n.d. | n.d. | n.d. | |
| MCG4655 | 16q22.1 | 0.3849 | n.s. | 1 | |
| MTF2 | 1p22.1 | 7.83E-04 | *** | 10 | |
| NACA | 12q13.3 | 0.0240 | * | 4 | |
| NDUFS4 | 5q11.1 | 5.06E-04 | *** | 5 | |
| NONO | Xq13.1 | 0.0015 | ** | 6 | |
| NSUN6 | 10p12.31 | 0.0010 | *** | 20 | |
| PAFAH1B3 | 19q13.1 | 0.0044 | ** | 8 | |
| PALM | 19p13.3 | 2.28E-04 | *** | 7 | |
| PHOX2A | 11q13.2 | 0.0223 | * | 26 | |
| PHOX2B | 4p12 | 0.0042 | ** | 18 | [15] |
| PILRB | 7q22.1 | 0.0084 | ** | 15 | |
| PKIA | 8q21.11 | 8.69E-04 | *** | 21 | |
| POU2F1 | 1q24.1-24.2 | 5.77E-04 | *** | 20 | |
| POU4F2 | 4q31.2 | 0.0106 | * | 1518 | [18,34] |
| PRKRA | 2q31.2 | 0.0042 | ** | 18 | |
| RABL2B; RABL2A | 2q13 | 0.0122 | * | 17 | |
| RAPGEF6 | 5q23.3 | 0.0097 | ** | 37 | [35] |
| REV1L | 2q11.2 | 8.99E-04 | *** | 9 | |
| RPL19 | 17q12 | 0.1034 | n.s. | 2 | |
| SEC61G | 7p11.2 | 0.0140 | * | 7 | |
| SEPHS1 | 10p14 | 4.51E-04 | *** | 6 | |
| SFRS3 | 6p21 | 0.0126 | * | 5 | |
| SHC1 | 1q21 | 0.0129 | * | 12 | |
| SLC18A1 | 8p21.3 | 0.0130 | * | 25 | |
| SLC35E2 | 1p36.33 | 0.0241 | * | 3 | [15] |
| SLC6A2 | 16q12.2 | 0.0012 | ** | 540 | |
| SMN1; SMN2 | 5q13 | 0.0104 | * | 8 | |
| SMPD4 | 2q21.1 | 0.0279 | * | 6 | |
| SPAST | 2p22.3 | 2.48E-05 | *** | 9 | |
| ST13 | 22q13.2 | 0.0324 | * | 5 | |
| TAF9B | Xq21.1 | 0.0243 | * | 7 | |
| TCP1 | 6q25.3 | 2.89E-04 | *** | 6 | |
| TFAP2B | 6p12.3 | 0.0115 | * | 13 | [14,31,33,34] |
| TH | 11p15.5 | 0.0126 | * | 11 | [15,32] |
| TIA1 | 2p14 | 5.99E-05 | *** | 16 | |
| TMSL8 | Xq22.1 | 0.2105 | n.s. | 2 | |
| TNFRSF25 | 1p36.31 | 0.0717 | n.s. | 8 | [15,33,36] |
| TOP2B | 3p24.2 | 2.49E-04 | *** | 4 | |
| TPRKB | 2p13.2 | 0.0386 | * | 4 | |
| UBE2E3 | 2q31.3 | 0.0110 | * | 13 | |
| UCKL1 | 20q13.33 | 0.0013 | ** | 11 | |
| VPS28 | 8q24.3 | 0.0090 | ** | 9 | |
| XRCC5 | 2q35 | 0.0092 | ** | 7 | |
| YWHAQ | 2p25.1 | 0.0400 | * | 5 |
Ver 1 = verification group 1; Cytoband = Chromosomal location; t-test = significance by Student's t-test; n.d. = not determined; Sign. = Significance level by Student's t-test, * p < 0,05, ** p < 0,01, *** p < 0,001, n.s. = not significant; FC = Fold change between groups. Transcripts selected for the second verification are highlighted in bold.