Table 3.
QPCR results of genes selected for the second verifiaction round
| Gene | Selection criteria | FC Ver 1 | t-test Ver 1 | FC Ver 2 | t-test Ver 2 |
| ATBF1 | p-value | 9 | 1.70E-05 | 2.7 | 0.032 |
| CACNA2D3 | FC | 133 | 0.0019 | 5.1 | 0.049 |
| CNTNAP2 | FC | 287 | 0.0011 | 5.1 | 0.0036 |
| DCUN1D2 | FC | 26 | 0.0027 | 1.0 | 0.46 |
| DPYSL3 | FC | 23 | 0.01 | 1.6 | 0.19 |
| FUSIP1 | LOH | 22 | 0.013 | 2.0 | 0.013 |
| GNB1 | PR | 10 | 0.0028 | 2.3 | 0.007 |
| POU4F2 | PR; FC | 1518 | 0.011 | 3.7 | 0.15 |
| RAPGEF6 | PR | 37 | 0.0097 | 1.2 | 0.36 |
| SLC35E2 | PR | 3 | 0.024 | 3.5 | 0.011 |
| SLC6A2 | FC | 540 | 0.0012 | 2.8 | 0.11 |
| TFAP2B | PR | 13 | 0.012 | 4.5 | 0.0049 |
Column 2: p-value = Most significant in Ver 1 and cancer involvement, FC = Top ten with highest fold change (FC), LOH = Localized in a common Loss of Heterozygosity (LOH) region, PR = Previously Reported in NB microarray expression studies; column 3–4: Ver 1 = verification group 1; column 5–6: Ver 2 = verification group 2;