Table 5.
Association of Selected Haplotypes With BP
| Systolic BP |
Diastolic BP |
||||||||
|---|---|---|---|---|---|---|---|---|---|
| Haplotype Serial No. | * SNP | Haplotype | Frequency%, | χ2 | Observed P | Empirical P† | χ2 | Observed P | Empirical P† |
| Hap1-4 | rs2315314 | G-T-G-C-C-G | 13.6 | 14.17 | 0.00020 | 0.00820 | 15.82 | 0.00007 | 0.00240 |
| Hap2-3 | rs7744171 | A-C-A | 16.8 | 2.89 | 0.08930 | 0.84543 | 12.12 | 0.00050 | 0.01460 |
| Hap3-1 | rs13237260 | A-A-G | 48.4 | 10.97 | 0.00090 | 0.02260 | 7.54 | 0.00600 | 0.13137 |
| Hap3-2 | rs13237260 | G-A-T | 37.1 | 11.94 | 0.00050 | 0.01420 | 7.34 | 0.00680 | 0.14537 |
| Hap4-2 | rs7804315 | T-C-A-A | 33.5 | 8.23 | 0.00410 | 0.10458 | 11.93 | 0.00060 | 0.01880 |
| Hap5-3 | rs12673992 | A-C-T | 24.3 | 7.99 | 0.00470 | 0.10098 | 11.96 | 0.00050 | 0.01460 |
| Hap6-2 | rs2160010 | T-C-G-G | 27.2 | 10.22 | 0.00140 | 0.03579 | 17.22 | 0.00003 | 0.00160 |
BP-associated SNP residing on haplotype.
Based on 5000 permutations, this accounts for multiple comparisons within each phenotype.