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. 2009 Aug 23;3:82. doi: 10.1186/1752-0509-3-82

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Copyright © 2009 Neuweger et al; licensee BioMed Central Ltd.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

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The ProMeTra system and its data integration concept. ProMeTra is a web-based system for the integration and visualization of "Omics" datasets. The connection to existing functional genomics platforms such as MeltDB is realized via SOAP-based Web Services. Researchers can upload their own metabolic pathway maps in an annotated SVG format and employ the ProMeTra functionality to render quantitative information originating from transcriptomics, proteomics or metabolomics experiments onto these images. The web interface allows the download of the enriched SVG images. Additionally, methods to upload quantitative results in CSV, or Microsoft EXCEL™ format are provided.