Table 1.
Summary of LongSAGE Data.
(A) | ||
Library | Total Reads | Total Tags |
18964 node- | 162,576 | 170,372 |
29271 node+ | 189,367 | 195,452 |
Combined | 351,943 | 365,824 |
(B) | ||
Fold Differential Expression | No. of Tags Elevated in Node-Positive | No. of Tags Elevated in Node-Negative |
50 | 12 | 22 |
25 | 6 | 74 |
10 | 644 | 505 |
5 | 3876 | 2659 |
Tumor no. 18964 (node-negative) and tumor no. 29271 (node-positive) were sequenced to a depth of 365,824 total tags. To minimize sequencing errors, only tags that were observed two or more times were counted.